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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100819461   presenilin-like protein At1g08700 
 gma-r.7   100819461   presenilin-like protein At1g08700 
 gma-m.5   100819461   presenilin-like protein At1g08700 
 gma-u.5   100780823   presenilin-like protein At2g29900 
 gma-u.5   100799010   presenilin-like protein At1g08700 
 gma-u.5   100799643   presenilin-like protein At2g29900 
 mtr-u.5   11433216   presenilin-like protein At1g08700 
 mtr-u.5   25493887   presenilin-like protein At2g29900 
 ppo-u.5   18105749   presenilin-like protein At2g29900 
 ppo-u.5   7482392   presenilin-like protein At1g08700 
 ath-u.5   PS2   Presenilin-2 
 ath-u.5   PS1   Presenilin-1 
 vvi-u.5   100263915   presenilin-like protein At1g08700 
 vvi-u.5   100262038   presenilin-like protein At2g29900 
 sly-u.5   101254775   presenilin-like protein At2g29900 
 sly-u.5   101256336   presenilin-like protein At1g08700 
 osa-u.5   9272037   presenilin-like protein At2g29900 
 osa-u.5   4324260   presenilin-like protein At1g08700 
 zma-u.5   100285753   uncharacterized LOC100285753 
 zma-u.5   100282893   presenilin 
 zma-u.5   100272410   Presenilin-like protein 

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Top 50 coexpressed genes to 100819461 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100819461 (gma-u.5 coexpression data)

CoexMap"100819461"


gmaLOC100819461 | Entrez gene ID : 100819461      
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 6 2 2 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016485 [list] [network] protein processing  (83 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (1870 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0042500 [list] [network] aspartic endopeptidase activity, intramembrane cleaving  (21 genes)  IEA  
Protein XP_003554065.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 8,  plas 1  (predict for XP_003554065.1)
Subcellular
localization
TargetP
scret 8,  other 4  (predict for XP_003554065.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100819461
gma-r.7
for
100819461
gma-m.5
for
100819461
gma-u.5
for
100780823
gma-u.5
for
100799010
gma-u.5
for
100799643
mtr-u.5
for
11433216
mtr-u.5
for
25493887
ppo-u.5
for
18105749
ppo-u.5
for
7482392
ath-u.5
for
PS2
ath-u.5
for
PS1
vvi-u.5
for
100263915
vvi-u.5
for
100262038
sly-u.5
for
101254775
sly-u.5
for
101256336
osa-u.5
for
9272037
osa-u.5
for
4324260
zma-u.5
for
100285753
zma-u.5
for
100282893
zma-u.5
for
100272410


Ortholog ID: 3434
Species gma gma mtr mtr ppo ppo ath ath bra bra vvi vvi ghi ghi bna bna cit cit sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC100819461 LOC100780823 LOC11433216 LOC25493887 LOC7482392 LOC18105749 PS1 PS2 LOC103868001 LOC103871613 LOC100262038 LOC100263915 LOC107941447 LOC107953480 LOC106377250 LOC106434107 LOC102625910 LOC102610609 LOC101254775 LOC101256336 LOC102590742 LOC102605567 LOC107823683 LOC107765978 LOC4324260 LOC9272037 LOC100282893 LOC100272410 LOC123086863 LOC123078175 LOC123443517 LOC123451134 LOC8062529 LOC8054664 LOC100835500 LOC100838582 CHLRE_02g078858v5
Function* presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin-like protein At1g08700 presenilin-like protein At2g29900 Presenilin-1 Presenilin-2 presenilin-like protein At2g29900 presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin-like protein At2g29900 presenilin-like protein At2g29900 presenilin-like protein At2g29900 presenilin-like protein At2g29900 presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin-like protein At1g08700 presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin Presenilin-like protein presenilin-like protein At2g29900 presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin-like protein At2g29900 presenilin-like protein At2g29900 presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin-like protein At2g29900 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr03083 Polycomb repressive complex 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
ppo03015 mRNA surveillance pathway 2
ppo04136 Autophagy - other 2
ppo04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00670 One carbon pool by folate 2
cit01240 Biosynthesis of cofactors 2
cit00020 Citrate cycle (TCA cycle) 2
cit01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03015 mRNA surveillance pathway 3
sly03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 8
nta04141 Protein processing in endoplasmic reticulum 3
nta00100 Steroid biosynthesis 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 4
tae01200 Carbon metabolism 4
tae01210 2-Oxocarboxylic acid metabolism 4
tae01230 Biosynthesis of amino acids 4
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100819461 100780823 11433216 25493887 7482392 18105749 837391 817540 103868001 103871613 100262038 100263915 107941447 107953480 106377250 106434107 102625910 102610609 101254775 101256336 102590742 102605567 107823683 107765978 4324260 9272037 100282893 100272410 123086863 123078175 123443517 123451134 8062529 8054664 100835500 100838582 5727261
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