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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8062529   presenilin-like protein At2g29900 
 zma-u.5   100285753   uncharacterized LOC100285753 
 zma-u.5   100282893   presenilin 
 zma-u.5   100272410   Presenilin-like protein 
 osa-u.5   9272037   presenilin-like protein At2g29900 
 osa-u.5   4324260   presenilin-like protein At1g08700 
 ath-u.5   PS2   Presenilin-2 
 ath-u.5   PS1   Presenilin-1 
 gma-u.5   100780823   presenilin-like protein At2g29900 
 gma-u.5   100819461   presenilin-like protein At1g08700 
 gma-u.5   100799010   presenilin-like protein At1g08700 
 sly-u.5   101256336   presenilin-like protein At1g08700 
 sly-u.5   101254775   presenilin-like protein At2g29900 
 vvi-u.5   100263915   presenilin-like protein At1g08700 
 vvi-u.5   100262038   presenilin-like protein At2g29900 
 ppo-u.5   18105749   presenilin-like protein At2g29900 
 ppo-u.5   7482392   presenilin-like protein At1g08700 
 mtr-u.5   11433216   presenilin-like protein At1g08700 
 mtr-u.5   25493887   presenilin-like protein At2g29900 

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Top 50 coexpressed genes to 8062529 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8062529 (sbi-r.1 coexpression data)

CoexMap"8062529"


sbiLOC8062529 | Entrez gene ID : 8062529    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 2 2 3 2 2 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016485 [list] [network] protein processing  (47 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO:0016020 [list] [network] membrane  (3172 genes)  IEA  
GO MF
GO:0042500 [list] [network] aspartic endopeptidase activity, intramembrane cleaving  (11 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002466836.1 [sequence] [blastp]
XP_021321417.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 9  (predict for XP_002466836.1)
chlo 6,  mito 3  (predict for XP_021321417.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002466836.1)
mito 7,  chlo 6  (predict for XP_021321417.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8062529

.
zma-u.5
for
100285753

.
zma-u.5
for
100282893

.
zma-u.5
for
100272410

.
osa-u.5
for
9272037

.
osa-u.5
for
4324260

.
ath-u.5
for
PS2

.
ath-u.5
for
PS1

.
gma-u.5
for
100780823

.
gma-u.5
for
100819461

.
gma-u.5
for
100799010

.
sly-u.5
for
101256336

.
sly-u.5
for
101254775

.
vvi-u.5
for
100263915

.
vvi-u.5
for
100262038

.
ppo-u.5
for
18105749

.
ppo-u.5
for
7482392

.
mtr-u.5
for
11433216

.
mtr-u.5
for
25493887

.


Ortholog ID: 3434
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol PS1 PS2 LOC100819461 LOC100780823 LOC101254775 LOC101256336 LOC4324260 LOC9272037 LOC100282893 LOC100272410 LOC103868001 LOC103871613 LOC100262038 LOC100263915 LOC7482392 LOC18105749 LOC11433216 LOC25493887 LOC123086863 LOC123078175 LOC123443517 LOC123451134 LOC107941447 LOC107953480 LOC106377250 LOC106434107 CHLRE_02g078858v5 LOC8062529 LOC8054664 LOC102590742 LOC102605567 LOC102625910 LOC102610609 LOC100835500 LOC100838582 LOC107823683 LOC107765978
Function* Presenilin-1 Presenilin-2 presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin-like protein At2g29900 presenilin-like protein At1g08700 presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin Presenilin-like protein presenilin-like protein At2g29900 presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin-like protein At1g08700 presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin-like protein At2g29900 presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin-like protein At2g29900 presenilin-like protein At2g29900 presenilin-like protein At2g29900 presenilin-like protein At2g29900 presenilin-like protein At2g29900 uncharacterized protein presenilin-like protein At2g29900 presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin-like protein At1g08700 presenilin-like protein At2g29900 presenilin-like protein At2g29900 presenilin-like protein At2g29900 presenilin-like protein At1g08700
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03015 mRNA surveillance pathway 3
sly03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
ppo03015 mRNA surveillance pathway 2
ppo04136 Autophagy - other 2
ppo04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr03083 Polycomb repressive complex 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 4
tae01200 Carbon metabolism 4
tae01210 2-Oxocarboxylic acid metabolism 4
tae01230 Biosynthesis of amino acids 4
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00670 One carbon pool by folate 2
cit01240 Biosynthesis of cofactors 2
cit00020 Citrate cycle (TCA cycle) 2
cit01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 8
nta04141 Protein processing in endoplasmic reticulum 3
nta00100 Steroid biosynthesis 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837391 817540 100819461 100780823 101254775 101256336 4324260 9272037 100282893 100272410 103868001 103871613 100262038 100263915 7482392 18105749 11433216 25493887 123086863 123078175 123443517 123451134 107941447 107953480 106377250 106434107 5727261 8062529 8054664 102590742 102605567 102625910 102610609 100835500 100838582 107823683 107765978
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