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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100819533   arginine--tRNA ligase, cytoplasmic 
 gma-r.7   100819533   arginine--tRNA ligase, cytoplasmic 
 gma-u.5   100796303   arginine--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100795626   arginine--tRNA ligase, cytoplasmic 
 gma-u.5   ARGS   arginyl-tRNA synthetase 
 mtr-u.5   25496992   arginine--tRNA ligase, cytoplasmic 
 mtr-u.5   25490148   arginine--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   25485317   arginine--tRNA ligase, cytoplasmic 
 ppo-u.5   7460441   arginine--tRNA ligase, chloroplastic/mitochondrial 
 ath-u.5   emb1027   Arginyl-tRNA synthetase, class Ic 
 ath-u.5   AT1G66530   Arginyl-tRNA synthetase, class Ic 
 bra-r.6   103866030   arginine--tRNA ligase, chloroplastic/mitochondrial 
 bra-r.6   103861619   arginine--tRNA ligase, chloroplastic/mitochondrial 
 bra-r.6   103834842   arginine--tRNA ligase, chloroplastic/mitochondrial 
 vvi-u.5   100261143   arginine--tRNA ligase, chloroplastic/mitochondrial 
 ghi-r.1   107958718   arginine--tRNA ligase, chloroplastic/mitochondrial 
 ghi-r.1   107940213   arginine--tRNA ligase, chloroplastic/mitochondrial 
 ghi-r.1   107932896   arginine--tRNA ligase, chloroplastic/mitochondrial 
 bna-r.1   106361347   arginine--tRNA ligase, chloroplastic/mitochondrial 
 bna-r.1   106401637   arginine--tRNA ligase, chloroplastic/mitochondrial 
 bna-r.1   106411344   arginine--tRNA ligase, chloroplastic/mitochondrial 
 cit-r.1   102606949   arginine--tRNA ligase, chloroplastic/mitochondrial-like 
 sly-u.5   101261392   arginine--tRNA ligase, chloroplastic/mitochondrial 
 sot-r.1   102578336   arginine--tRNA ligase, chloroplastic/mitochondrial-like 
 nta-r.1   107776442   arginine--tRNA ligase, chloroplastic/mitochondrial-like 
 nta-r.1   107796381   arginine--tRNA ligase, chloroplastic/mitochondrial-like 
 nta-r.1   107776459   arginine--tRNA ligase, chloroplastic/mitochondrial-like 
 osa-u.5   4324056   arginine--tRNA ligase, cytoplasmic 
 osa-u.5   4337898   arginine--tRNA ligase, chloroplastic/mitochondrial 
 zma-u.5   100273441   arginyl-tRNA synthetase 
 zma-u.5   100281742   arginyl-tRNA synthetase 
 tae-r.2   123039186   arginine--tRNA ligase, cytoplasmic 
 tae-r.2   123077671   arginine--tRNA ligase, cytoplasmic 
 tae-r.2   123113910   arginine--tRNA ligase, cytoplasmic 
 hvu-r.1   123426392   arginine--tRNA ligase, cytoplasmic-like 
 sbi-r.1   110430625   arginine--tRNA ligase, chloroplastic/mitochondrial-like 
 bdi-r.1   100829801   arginine--tRNA ligase, chloroplastic/mitochondrial 
 cre-r.1   CHLRE_03g143887v5   uncharacterized protein 

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Top 50 coexpressed genes to 100819533 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100819533 (gma-u.5 coexpression data)

CoexMap"100819533"


gmaLOC100819533 | Entrez gene ID : 100819533      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 1 2 3 1 3 3 1 1 1 3 2 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00970 [list] [network] Aminoacyl-tRNA biosynthesis (137 genes)
GO BP
GO:0006420 [list] [network] arginyl-tRNA aminoacylation  (4 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0004814 [list] [network] arginine-tRNA ligase activity  (4 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3753 genes)  IEA  
Protein XP_003529061.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1,  mito 1,  vacu 1  (predict for XP_003529061.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003529061.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100819533
gma-r.7
for
100819533
gma-u.5
for
100796303
gma-u.5
for
100795626
gma-u.5
for
ARGS
mtr-u.5
for
25496992
mtr-u.5
for
25490148
mtr-u.5
for
25485317
ppo-u.5
for
7460441
ath-u.5
for
emb1027
ath-u.5
for
AT1G66530
bra-r.6
for
103866030
bra-r.6
for
103861619
bra-r.6
for
103834842
vvi-u.5
for
100261143
ghi-r.1
for
107958718
ghi-r.1
for
107940213
ghi-r.1
for
107932896
bna-r.1
for
106361347
bna-r.1
for
106401637
bna-r.1
for
106411344
cit-r.1
for
102606949
sly-u.5
for
101261392
sot-r.1
for
102578336
nta-r.1
for
107776442
nta-r.1
for
107796381
nta-r.1
for
107776459
osa-u.5
for
4324056
osa-u.5
for
4337898
zma-u.5
for
100273441
zma-u.5
for
100281742
tae-r.2
for
123039186
tae-r.2
for
123077671
tae-r.2
for
123113910
hvu-r.1
for
123426392
sbi-r.1
for
110430625
bdi-r.1
for
100829801
cre-r.1
for
CHLRE_03g143887v5


Ortholog ID: 4422
Species gma gma gma mtr mtr mtr ppo ath ath bra bra bra vvi ghi ghi ghi bna bna bna cit sly sot nta nta nta osa osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC100819533 LOC100796303 ARGS LOC25496992 LOC25485317 LOC11415626 LOC7460441 emb1027 AT1G66530 LOC103866030 LOC103861619 LOC103834842 LOC100261143 LOC107958718 LOC107940213 LOC107907181 LOC106361347 LOC106401637 LOC106411344 LOC102606949 LOC101261392 LOC102578336 LOC107776442 LOC107796381 LOC107806361 LOC4324056 LOC4337898 LOC100273441 LOC100281742 LOC123077671 LOC123113910 LOC123180621 LOC123426392 LOC110430625 LOC100829801 CHLRE_03g143887v5
Function* arginine--tRNA ligase, cytoplasmic arginine--tRNA ligase, chloroplastic/mitochondrial arginyl-tRNA synthetase arginine--tRNA ligase, cytoplasmic arginine--tRNA ligase, cytoplasmic arginine--tRNA ligase, cytoplasmic arginine--tRNA ligase, chloroplastic/mitochondrial Arginyl-tRNA synthetase, class Ic Arginyl-tRNA synthetase, class Ic arginine--tRNA ligase, chloroplastic/mitochondrial arginine--tRNA ligase, chloroplastic/mitochondrial arginine--tRNA ligase, chloroplastic/mitochondrial arginine--tRNA ligase, chloroplastic/mitochondrial arginine--tRNA ligase, chloroplastic/mitochondrial arginine--tRNA ligase, chloroplastic/mitochondrial arginine--tRNA ligase, chloroplastic/mitochondrial arginine--tRNA ligase, chloroplastic/mitochondrial arginine--tRNA ligase, chloroplastic/mitochondrial arginine--tRNA ligase, chloroplastic/mitochondrial arginine--tRNA ligase, chloroplastic/mitochondrial-like arginine--tRNA ligase, chloroplastic/mitochondrial arginine--tRNA ligase, chloroplastic/mitochondrial-like arginine--tRNA ligase, chloroplastic/mitochondrial-like arginine--tRNA ligase, chloroplastic/mitochondrial-like arginine--tRNA ligase, chloroplastic/mitochondrial arginine--tRNA ligase, cytoplasmic arginine--tRNA ligase, chloroplastic/mitochondrial arginyl-tRNA synthetase arginyl-tRNA synthetase arginine--tRNA ligase, cytoplasmic arginine--tRNA ligase, cytoplasmic arginine--tRNA ligase, cytoplasmic arginine--tRNA ligase, cytoplasmic-like arginine--tRNA ligase, chloroplastic/mitochondrial-like arginine--tRNA ligase, chloroplastic/mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 6
gma03040 Spliceosome 3
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00061 Fatty acid biosynthesis 2
gma00071 Fatty acid degradation 2
gma01212 Fatty acid metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 5
mtr00010 Glycolysis / Gluconeogenesis 2
mtr01200 Carbon metabolism 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 5
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 3
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 10
ath00970 Aminoacyl-tRNA biosynthesis 5
ath00300 Lysine biosynthesis 4
ath00230 Purine metabolism 3
ath01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 5
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 6
bra00250 Alanine, aspartate and glutamate metabolism 4
bra01240 Biosynthesis of cofactors 4
bra00230 Purine metabolism 3
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 6
sly03008 Ribosome biogenesis in eukaryotes 2
sly03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 9
nta00220 Arginine biosynthesis 2
nta00240 Pyrimidine metabolism 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 5
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 7
zma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 4
tae03013 Nucleocytoplasmic transport 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
sbi00564 Glycerophospholipid metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100819533 100796303 100194418 25496992 25485317 11415626 7460441 828736 842971 103866030 103861619 103834842 100261143 107958718 107940213 107907181 106361347 106401637 106411344 102606949 101261392 102578336 107776442 107796381 107806361 4324056 4337898 100273441 100281742 123077671 123113910 123180621 123426392 110430625 100829801 5721327
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