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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   RAR1-2   CHORD superfamily protein 
 gma-r.7   RAR1-2   CHORD superfamily protein 
 gma-u.5   RAR1-1   RAR1 protein 
 mtr-u.5   11415126   cysteine and histidine-rich domain-containing protein RAR1 
 ppo-u.5   7476770   cysteine and histidine-rich domain-containing protein RAR1 
 ath-u.5   PBS2   cysteine and histidine-rich domain-containing protein RAR1 
 bra-r.6   103852130   cysteine and histidine-rich domain-containing protein RAR1 
 bra-r.6   103832900   cysteine and histidine-rich domain-containing protein RAR1 
 vvi-u.5   100246439   cysteine and histidine-rich domain-containing protein RAR1 
 ghi-r.1   107930282   cysteine and histidine-rich domain-containing protein RAR1 
 ghi-r.1   107890826   cysteine and histidine-rich domain-containing protein RAR1 
 bna-r.1   106412132   cysteine and histidine-rich domain-containing protein RAR1 
 bna-r.1   106380999   cysteine and histidine-rich domain-containing protein RAR1 
 bna-r.1   106348816   cysteine and histidine-rich domain-containing protein RAR1-like 
 sly-u.5   101245327   cysteine and histidine-rich domain-containing protein RAR1 
 nta-r.1   107765834   cysteine and histidine-rich domain-containing protein RAR1-like 
 nta-r.1   107784690   cysteine and histidine-rich domain-containing protein RAR1 
 osa-u.5   4329567   cysteine and histidine-rich domain-containing protein RAR1-like 
 zma-u.5   103653593   cysteine and histidine-rich domain-containing protein RAR1 
 zma-u.5   100286145   integrin beta-1-binding protein 2 
 tae-r.2   123190132   cysteine and histidine-rich domain-containing protein RAR1 
 tae-r.2   123054246   cysteine and histidine-rich domain-containing protein RAR1 
 tae-r.2   123046400   cysteine and histidine-rich domain-containing protein RAR1 
 hvu-r.1   123427567   cysteine and histidine-rich domain-containing protein RAR1 
 sbi-r.1   8058654   cysteine and histidine-rich domain-containing protein RAR1 
 bdi-r.1   100841957   cysteine and histidine-rich domain-containing protein RAR1 

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Top 50 coexpressed genes to RAR1-2 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RAR1-2 (gma-u.5 coexpression data)

CoexMap"100819671"


gmaRAR1-2 | Entrez gene ID : 100819671      
Species gma mtr ppo ath bra vvi ghi bna sly nta osa zma tae hvu sbi bdi sot cre cit
Paralog 3 1 1 1 2 1 2 3 1 2 1 2 3 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx04626 [list] [network] Plant-pathogen interaction (466 genes)
GO BP
GO:0042742 [list] [network] defense response to bacterium  (63 genes)  IEA  
GO:0050832 [list] [network] defense response to fungus  (84 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0051879 [list] [network] Hsp90 protein binding  (18 genes)  IEA  
Protein NP_001241419.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  mito 1  (predict for NP_001241419.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001241419.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
RAR1-2
gma-r.7
for
RAR1-2
gma-u.5
for
RAR1-1
mtr-u.5
for
11415126
ppo-u.5
for
7476770
ath-u.5
for
PBS2
bra-r.6
for
103852130
bra-r.6
for
103832900
vvi-u.5
for
100246439
ghi-r.1
for
107930282
ghi-r.1
for
107890826
bna-r.1
for
106412132
bna-r.1
for
106380999
bna-r.1
for
106348816
sly-u.5
for
101245327
nta-r.1
for
107765834
nta-r.1
for
107784690
osa-u.5
for
4329567
zma-u.5
for
103653593
zma-u.5
for
100286145
tae-r.2
for
123190132
tae-r.2
for
123054246
tae-r.2
for
123046400
hvu-r.1
for
123427567
sbi-r.1
for
8058654
bdi-r.1
for
100841957


Ortholog ID: 9162
Species gma gma mtr ppo ath bra bra vvi ghi ghi bna bna bna sly nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol RAR1-2 RAR1-1 LOC11415126 LOC7476770 PBS2 LOC103852130 LOC103832900 LOC100246439 LOC107930282 LOC107890826 LOC106412132 LOC106380999 LOC106348816 LOC101245327 LOC107765834 LOC107784690 LOC4329567 LOC103653593 LOC100286145 LOC123190132 LOC123054246 LOC123046400 LOC123427567 LOC8058654 LOC100841957
Function* CHORD superfamily protein RAR1 protein cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1-like cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1-like cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1-like cysteine and histidine-rich domain-containing protein RAR1 integrin beta-1-binding protein 2 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 4
gma03040 Spliceosome 4
gma03013 Nucleocytoplasmic transport 3
gma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 6
mtr04626 Plant-pathogen interaction 3
mtr03040 Spliceosome 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 6
ppo04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 5
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 4
bra00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi04626 Plant-pathogen interaction 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi04626 Plant-pathogen interaction 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna04626 Plant-pathogen interaction 3
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna04626 Plant-pathogen interaction 3
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna04626 Plant-pathogen interaction 3
bna00220 Arginine biosynthesis 3
bna01210 2-Oxocarboxylic acid metabolism 3
bna01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 5
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03420 Nucleotide excision repair 3
osa03020 RNA polymerase 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 5
zma04626 Plant-pathogen interaction 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 4
tae00510 N-Glycan biosynthesis 3
tae00513 Various types of N-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100819671 100194419 11415126 7476770 835244 103852130 103832900 100246439 107930282 107890826 106412132 106380999 106348816 101245327 107765834 107784690 4329567 103653593 100286145 123190132 123054246 123046400 123427567 8058654 100841957
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