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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7476770   cysteine and histidine-rich domain-containing protein RAR1 
 ppo-r.4   7476770   cysteine and histidine-rich domain-containing protein RAR1 
 gma-u.5   RAR1-1   RAR1 protein 
 gma-u.5   RAR1-2   CHORD superfamily protein 
 mtr-u.5   11415126   cysteine and histidine-rich domain-containing protein RAR1 
 ath-u.5   PBS2   cysteine and histidine-rich domain-containing protein RAR1 
 vvi-u.5   100246439   cysteine and histidine-rich domain-containing protein RAR1 
 sly-u.5   101245327   cysteine and histidine-rich domain-containing protein RAR1 
 osa-u.5   4329567   cysteine and histidine-rich domain-containing protein RAR1-like 
 zma-u.5   103653593   cysteine and histidine-rich domain-containing protein RAR1 
 zma-u.5   100286145   integrin beta-1-binding protein 2 

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Top 50 coexpressed genes to 7476770 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7476770 (ppo-u.5 coexpression data)

CoexMap"7476770"


ppoLOC7476770 | Entrez gene ID : 7476770    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04626 [list] [network] Plant-pathogen interaction (275 genes)
GO BP
GO:0042742 [list] [network] defense response to bacterium  (13 genes)  IEA  
GO:0050832 [list] [network] defense response to fungus  (36 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0051879 [list] [network] Hsp90 protein binding  (11 genes)  IEA  
Protein XP_052303557.1 [sequence] [blastp]
XP_052303558.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  nucl 3,  chlo_mito 3  (predict for XP_052303557.1)
mito 4,  chlo 3,  nucl 3  (predict for XP_052303558.1)
Subcellular
localization
TargetP
other 9  (predict for XP_052303557.1)
other 5  (predict for XP_052303558.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7476770

.
ppo-r.4
for
7476770

.
gma-u.5
for
RAR1-1

.
gma-u.5
for
RAR1-2

.
mtr-u.5
for
11415126

.
ath-u.5
for
PBS2

.
vvi-u.5
for
100246439

.
sly-u.5
for
101245327

.
osa-u.5
for
4329567

.
zma-u.5
for
103653593

.
zma-u.5
for
100286145

.


Ortholog ID: 9162
Species ath gma gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi bdi nta nta
Symbol PBS2 RAR1-1 RAR1-2 LOC101245327 LOC4329567 LOC100286145 LOC103653593 LOC103832900 LOC103852130 LOC100246439 LOC7476770 LOC11415126 LOC123046400 LOC123190132 LOC123427567 LOC107890826 LOC107930282 LOC106348816 LOC106412132 LOC8058654 LOC100841957 LOC107765834 LOC107784690
Function* cysteine and histidine-rich domain-containing protein RAR1 RAR1 protein CHORD superfamily protein cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1-like integrin beta-1-binding protein 2 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1-like cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1 cysteine and histidine-rich domain-containing protein RAR1-like cysteine and histidine-rich domain-containing protein RAR1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 4
gma03040 Spliceosome 4
gma03013 Nucleocytoplasmic transport 3
gma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03420 Nucleotide excision repair 3
osa03020 RNA polymerase 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 5
zma04626 Plant-pathogen interaction 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 4
bra00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 5
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 6
ppo04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 6
mtr04626 Plant-pathogen interaction 3
mtr03040 Spliceosome 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 4
tae00510 N-Glycan biosynthesis 3
tae00513 Various types of N-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi04626 Plant-pathogen interaction 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi04626 Plant-pathogen interaction 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna04626 Plant-pathogen interaction 3
bna00220 Arginine biosynthesis 3
bna01210 2-Oxocarboxylic acid metabolism 3
bna01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna04626 Plant-pathogen interaction 3
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 5
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835244 100194419 100819671 101245327 4329567 100286145 103653593 103832900 103852130 100246439 7476770 11415126 123046400 123190132 123427567 107890826 107930282 106348816 106412132 8058654 100841957 107765834 107784690
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