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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100819819   26S proteasome regulatory subunit 6B homolog 
 gma-r.7   100819819   26S proteasome regulatory subunit 6B homolog 
 gma-u.5   100820353   26S proteasome regulatory subunit 6B homolog 
 gma-u.5   100783650   26S proteasome regulatory subunit 6B homolog 
 mtr-u.5   11438063   26S proteasome regulatory subunit 6B homolog 
 ppo-u.5   7495669   26S proteasome regulatory subunit 6B homolog 
 ppo-u.5   7464049   26S proteasome regulatory subunit 6B homolog 
 ath-u.5   RPT3   regulatory particle triple-A ATPase 3 
 bra-r.6   103845256   26S proteasome regulatory subunit 6B homolog 
 bra-r.6   103856703   26S proteasome regulatory subunit 6B homolog 
 bra-r.6   103851649   26S proteasome regulatory subunit 6B homolog 
 vvi-u.5   100246786   26S proteasome regulatory subunit 6B homolog 
 ghi-r.1   107920245   26S proteasome regulatory subunit 6B homolog 
 ghi-r.1   107933300   26S proteasome regulatory subunit 6B homolog 
 ghi-r.1   107933659   26S proteasome regulatory subunit 6B homolog 
 bna-r.1   106388256   26S proteasome regulatory subunit 6B homolog 
 bna-r.1   106435088   26S proteasome regulatory subunit 6B homolog 
 bna-r.1   106387166   26S proteasome regulatory subunit 6B homolog 
 cit-r.1   102623670   26S proteasome regulatory subunit 6B homolog 
 sly-u.5   101268289   26S proteasome regulatory subunit 6B homolog 
 sly-u.5   101261929   26S proteasome regulatory subunit 6B homolog 
 sot-r.1   102579765   26S protease regulatory subunit 6B homolog 
 sot-r.1   102577768   POTATP1 
 nta-r.1   107770176   26S proteasome regulatory subunit 6B homolog 
 nta-r.1   107770439   26S proteasome regulatory subunit 6B homolog 
 nta-r.1   107791257   26S proteasome regulatory subunit 6B homolog 
 osa-u.5   4329182   26S proteasome regulatory subunit 6B homolog 
 zma-u.5   542160   26S proteasome regulatory complex ATPase RPT3 
 zma-u.5   100284233   26S protease regulatory subunit 6B-like protein 
 tae-r.2   123043518   26S proteasome regulatory subunit 6B homolog 
 hvu-r.1   123444265   26S proteasome regulatory subunit 6B homolog 
 hvu-r.1   123427932   26S proteasome regulatory subunit 6B homolog 
 sbi-r.1   110431390   26S protease regulatory subunit 6B homolog 
 sbi-r.1   8062221   26S protease regulatory subunit 6B homolog 
 bdi-r.1   100837620   26S proteasome regulatory subunit 6B homolog 
 bdi-r.1   100839111   26S proteasome regulatory subunit 6B homolog 
 cre-r.1   CHLRE_09g402450v5   uncharacterized protein 

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Top 50 coexpressed genes to 100819819 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100819819 (gma-u.5 coexpression data)

CoexMap"100819819"


gmaLOC100819819 | Entrez gene ID : 100819819      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 1 3 1 3 3 1 2 2 3 1 2 1 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03050 [list] [network] Proteasome (106 genes)
GO BP
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (267 genes)  IEA  
GO CC
GO:0008540 [list] [network] proteasome regulatory particle, base subcomplex  (36 genes)  IEA  
GO MF
GO:0036402 [list] [network] proteasome-activating activity  (27 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (756 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3753 genes)  IEA  
Protein XP_003538340.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  cysk 1,  nucl 1,  golg 1,  cysk_plas 1  (predict for XP_003538340.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003538340.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100819819
gma-r.7
for
100819819
gma-u.5
for
100820353
gma-u.5
for
100783650
mtr-u.5
for
11438063
ppo-u.5
for
7495669
ppo-u.5
for
7464049
ath-u.5
for
RPT3
bra-r.6
for
103845256
bra-r.6
for
103856703
bra-r.6
for
103851649
vvi-u.5
for
100246786
ghi-r.1
for
107920245
ghi-r.1
for
107933300
ghi-r.1
for
107933659
bna-r.1
for
106388256
bna-r.1
for
106435088
bna-r.1
for
106387166
cit-r.1
for
102623670
sly-u.5
for
101268289
sly-u.5
for
101261929
sot-r.1
for
102579765
sot-r.1
for
102577768
nta-r.1
for
107770176
nta-r.1
for
107770439
nta-r.1
for
107791257
osa-u.5
for
4329182
zma-u.5
for
542160
zma-u.5
for
100284233
tae-r.2
for
123043518
hvu-r.1
for
123444265
hvu-r.1
for
123427932
sbi-r.1
for
110431390
sbi-r.1
for
8062221
bdi-r.1
for
100837620
bdi-r.1
for
100839111
cre-r.1
for
CHLRE_09g402450v5


Ortholog ID: 2945
Species gma gma gma mtr ppo ppo ath bra bra bra vvi ghi ghi ghi bna bna bna cit sly sly sot sot nta nta nta osa zma zma tae hvu hvu hvu sbi sbi bdi bdi cre
Symbol LOC100819819 LOC100820353 LOC100783650 LOC11438063 LOC7495669 LOC7464049 RPT3 LOC103845256 LOC103856703 LOC103851649 LOC100246786 LOC107920245 LOC107933300 LOC107890897 LOC106388256 LOC106435088 LOC106420504 LOC102623670 LOC101268289 LOC101261929 LOC102579765 LOC102577768 LOC107770176 LOC107770439 LOC107807278 LOC4329182 LOC542160 LOC100284233 LOC123054679 LOC123444265 LOC123427932 LOC123424599 LOC110431390 LOC8062221 LOC100837620 LOC100839111 CHLRE_09g402450v5
Function* 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog regulatory particle triple-A ATPase 3 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S protease regulatory subunit 6B homolog POTATP1 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory complex ATPase RPT3 26S protease regulatory subunit 6B-like protein 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S protease regulatory subunit 6B homolog 26S protease regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 4
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 5
gma04141 Protein processing in endoplasmic reticulum 4
gma01200 Carbon metabolism 2
gma03015 mRNA surveillance pathway 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 7
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 3
mtr04141 Protein processing in endoplasmic reticulum 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 4
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 16
ath00010 Glycolysis / Gluconeogenesis 3
ath01200 Carbon metabolism 3
ath01230 Biosynthesis of amino acids 3
ath00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 4
bra04120 Ubiquitin mediated proteolysis 3
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 10
bra04141 Protein processing in endoplasmic reticulum 4
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 9
bra03040 Spliceosome 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 8
vvi00020 Citrate cycle (TCA cycle) 4
vvi01200 Carbon metabolism 4
vvi01210 2-Oxocarboxylic acid metabolism 3
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 9
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 8
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 6
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 9
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 9
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
nta04122 Sulfur relay system 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 10
osa00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 9
zma04814 Motor proteins 5
zma03420 Nucleotide excision repair 2
zma04141 Protein processing in endoplasmic reticulum 2
zma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 10
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 3
tae00790 Folate biosynthesis 2
tae03013 Nucleocytoplasmic transport 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 10
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 8
sbi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 10
sbi04141 Protein processing in endoplasmic reticulum 4
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 6
bdi04120 Ubiquitin mediated proteolysis 3
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03015 mRNA surveillance pathway 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 5
bdi00190 Oxidative phosphorylation 3
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 11
cre04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100819819 100820353 100783650 11438063 7495669 7464049 835941 103845256 103856703 103851649 100246786 107920245 107933300 107890897 106388256 106435088 106420504 102623670 101268289 101261929 102579765 102577768 107770176 107770439 107807278 4329182 542160 100284233 123054679 123444265 123427932 123424599 110431390 8062221 100837620 100839111 66054811
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