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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7495669   26S proteasome regulatory subunit 6B homolog 
 ppo-r.4   7495669   26S proteasome regulatory subunit 6B homolog 
 ppo-u.5   7464049   26S proteasome regulatory subunit 6B homolog 
 gma-u.5   100820353   26S proteasome regulatory subunit 6B homolog 
 gma-u.5   100819819   26S proteasome regulatory subunit 6B homolog 
 gma-u.5   100783650   26S proteasome regulatory subunit 6B homolog 
 mtr-u.5   11438063   26S proteasome regulatory subunit 6B homolog 
 ath-u.5   RPT3   regulatory particle triple-A ATPase 3 
 vvi-u.5   100246786   26S proteasome regulatory subunit 6B homolog 
 sly-u.5   101268289   26S proteasome regulatory subunit 6B homolog 
 sly-u.5   101261929   26S proteasome regulatory subunit 6B homolog 
 osa-u.5   4329182   26S proteasome regulatory subunit 6B homolog 
 zma-u.5   542160   26S proteasome regulatory complex ATPase RPT3 
 zma-u.5   100284233   26S protease regulatory subunit 6B-like protein 

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Top 50 coexpressed genes to 7495669 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7495669 (ppo-u.5 coexpression data)

CoexMap"7495669"


ppoLOC7495669 | Entrez gene ID : 7495669    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 3 1 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03050 [list] [network] Proteasome (82 genes)
GO BP
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (182 genes)  IEA  
GO CC
GO:0008540 [list] [network] proteasome regulatory particle, base subcomplex  (25 genes)  IEA  
GO MF
GO:0036402 [list] [network] proteasome-activating activity  (18 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (550 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
Protein XP_002307945.3 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9  (predict for XP_002307945.3)
Subcellular
localization
TargetP
other 8  (predict for XP_002307945.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7495669

.
ppo-r.4
for
7495669

.
ppo-u.5
for
7464049

.
gma-u.5
for
100820353

.
gma-u.5
for
100819819

.
gma-u.5
for
100783650

.
mtr-u.5
for
11438063

.
ath-u.5
for
RPT3

.
vvi-u.5
for
100246786

.
sly-u.5
for
101268289

.
sly-u.5
for
101261929

.
osa-u.5
for
4329182

.
zma-u.5
for
542160

.
zma-u.5
for
100284233

.


Ortholog ID: 2945
Species ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi nta nta
Symbol RPT3 LOC100783650 LOC100819819 LOC101268289 LOC101261929 LOC4329182 LOC100284233 LOC542160 LOC103856703 LOC103851649 LOC100246786 LOC7464049 LOC7495669 LOC11438063 LOC123054679 LOC123444265 LOC123424599 LOC107933300 LOC107920245 LOC106435088 LOC106420504 CHLRE_09g402450v5 LOC8062221 LOC110431390 LOC102579765 LOC102577768 LOC102623670 LOC100839111 LOC107807278 LOC107770176
Function* regulatory particle triple-A ATPase 3 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S protease regulatory subunit 6B-like protein 26S proteasome regulatory complex ATPase RPT3 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog uncharacterized protein 26S protease regulatory subunit 6B homolog 26S protease regulatory subunit 6B homolog 26S protease regulatory subunit 6B homolog POTATP1 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog 26S proteasome regulatory subunit 6B homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 16
ath00010 Glycolysis / Gluconeogenesis 3
ath01200 Carbon metabolism 3
ath01230 Biosynthesis of amino acids 3
ath00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 7
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 4
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 10
osa00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 10
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 9
zma04814 Motor proteins 5
zma03420 Nucleotide excision repair 2
zma04141 Protein processing in endoplasmic reticulum 2
zma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 10
bra04141 Protein processing in endoplasmic reticulum 4
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 9
bra03040 Spliceosome 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 8
vvi00020 Citrate cycle (TCA cycle) 4
vvi01200 Carbon metabolism 4
vvi01210 2-Oxocarboxylic acid metabolism 3
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 4
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 3
mtr04141 Protein processing in endoplasmic reticulum 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 3
tae00790 Folate biosynthesis 2
tae03013 Nucleocytoplasmic transport 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 11
cre04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 10
sbi04141 Protein processing in endoplasmic reticulum 4
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 8
sbi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 8
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 9
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 5
bdi00190 Oxidative phosphorylation 3
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 9
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
nta04122 Sulfur relay system 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 6
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835941 100783650 100819819 101268289 101261929 4329182 100284233 542160 103856703 103851649 100246786 7464049 7495669 11438063 123054679 123444265 123424599 107933300 107920245 106435088 106420504 66054811 8062221 110431390 102579765 102577768 102623670 100839111 107807278 107770176
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