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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100820376   protein argonaute 4 
 gma-r.7   100820376   protein argonaute 4 
 gma-m.5   100820376   protein argonaute 4 
 gma-u.5   100792105   protein argonaute 4 
 gma-u.5   100779439   protein argonaute 4 
 mtr-u.5   25496286   protein argonaute 4 
 mtr-u.5   11433386   protein argonaute 4 
 mtr-u.5   11439465   protein argonaute 16 
 ppo-u.5   7479625   protein argonaute 4A 
 ppo-u.5   7455965   protein argonaute 16 
 ppo-u.5   7453743   protein argonaute 4A 
 ath-u.5   AGO4   Argonaute family protein 
 ath-u.5   AGO6   Argonaute family protein 
 vvi-u.5   100260151   protein argonaute 4A 
 vvi-u.5   100243183   protein argonaute 16 
 sly-u.5   AGO4B   Argonaute 4B 
 sly-u.5   101246438   protein argonaute 4-like 
 sly-u.5   AGO4D   Argonaute 4D 
 osa-u.5   4324438   protein argonaute 4A-like 
 osa-u.5   4335025   protein argonaute 4B-like 
 osa-u.5   4342886   protein argonaute 16-like 
 zma-u.5   100383316   argonaute104 
 zma-u.5   100382704   uncharacterized LOC100382704 

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Top 50 coexpressed genes to 100820376 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100820376 (gma-u.5 coexpression data)

CoexMap"100820376"


gmaLOC100820376 | Entrez gene ID : 100820376      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 5 3 3 2 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0035194 [list] [network] regulatory ncRNA-mediated post-transcriptional gene silencing  (22 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0004521 [list] [network] RNA endonuclease activity  (259 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003555656.1 [sequence] [blastp]
XP_006605639.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  cyto 1,  plas 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_003555656.1)
nucl 4,  chlo 3,  cyto_nucl 3  (predict for XP_006605639.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003555656.1)
other 5,  mito 5  (predict for XP_006605639.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100820376

.
gma-r.7
for
100820376

.
gma-m.5
for
100820376

.
gma-u.5
for
100792105

.
gma-u.5
for
100779439

.
mtr-u.5
for
25496286

.
mtr-u.5
for
11433386

.
mtr-u.5
for
11439465

.
ppo-u.5
for
7479625

.
ppo-u.5
for
7455965

.
ppo-u.5
for
7453743

.
ath-u.5
for
AGO4

.
ath-u.5
for
AGO6

.
vvi-u.5
for
100260151

.
vvi-u.5
for
100243183

.
sly-u.5
for
AGO4B

.
sly-u.5
for
101246438

.
sly-u.5
for
AGO4D

.
osa-u.5
for
4324438

.
osa-u.5
for
4335025

.
osa-u.5
for
4342886

.
zma-u.5
for
100383316

.
zma-u.5
for
100382704

.


Ortholog ID: 1140
Species ath ath gma gma sly osa osa zma bra bra vvi ppo ppo mtr tae hvu hvu ghi ghi bna bna sbi sbi sot cit cit bdi bdi nta
Symbol AGO4 AGO6 LOC100792105 LOC100778875 AGO4D LOC4324438 LOC4342886 LOC100383316 LOC103857461 LOC103851403 LOC100260151 LOC7453743 LOC7479625 LOC11439465 LOC123150147 LOC123443511 LOC123395895 LOC107959046 LOC107943176 LOC106388008 LOC106425688 LOC8066572 LOC8061215 LOC102583338 LOC102615576 LOC102622330 LOC100845074 LOC100828729 LOC107784197
Function* Argonaute family protein Argonaute family protein protein argonaute 4 protein argonaute 6 Argonaute 4D protein argonaute 4A-like protein argonaute 16-like argonaute104 protein argonaute 6 protein argonaute 9 protein argonaute 4A protein argonaute 4A protein argonaute 4A protein argonaute 16 protein argonaute 4B protein argonaute 4A protein argonaute 16-like protein argonaute 4 protein argonaute 4 protein argonaute 6 protein argonaute 9 protein argonaute 4B protein argonaute 16 protein argonaute 16-like protein argonaute 4B-like protein argonaute 4-like protein argonaute 4A protein argonaute 16 protein argonaute 4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 2
ath03460 Fanconi anemia pathway 2
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 5
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00052 Galactose metabolism 2
sly00500 Starch and sucrose metabolism 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03013 Nucleocytoplasmic transport 3
osa03082 ATP-dependent chromatin remodeling 2
osa03015 mRNA surveillance pathway 2
osa03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 9
bra03420 Nucleotide excision repair 3
bra03430 Mismatch repair 3
bra03460 Fanconi anemia pathway 3
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
mtr03440 Homologous recombination 2
mtr03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 5
hvu03030 DNA replication 2
hvu03410 Base excision repair 2
hvu03420 Nucleotide excision repair 2
hvu03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi00220 Arginine biosynthesis 2
ghi00230 Purine metabolism 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 2
sbi03410 Base excision repair 2
sbi03420 Nucleotide excision repair 2
sbi03430 Mismatch repair 2
sbi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
bdi03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817246 817856 100792105 100778875 101248049 4324438 4342886 100383316 103857461 103851403 100260151 7453743 7479625 11439465 123150147 123443511 123395895 107959046 107943176 106388008 106425688 8066572 8061215 102583338 102615576 102622330 100845074 100828729 107784197
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