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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100821638   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 
 osa-u.5   4330371   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 
 zma-u.5   100216988   uncharacterized LOC100216988 
 zma-u.5   103653935   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 
 ath-u.5   PIE1   SNF2 domain-containing protein / helicase domain-containing protein 
 gma-u.5   100795613   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 
 gma-u.5   100794898   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 
 sly-u.5   101248082   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 
 vvi-u.5   100248703   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 
 ppo-u.5   18094897   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 
 ppo-u.5   7478135   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 
 mtr-u.5   25483514   protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 

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Top 50 coexpressed genes to 100821638 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100821638 (bdi-r.1 coexpression data)

CoexMap"100821638"


bdiLOC100821638 | Entrez gene ID : 100821638      
Species bdi osa zma ath gma sly vvi ppo mtr hvu bna cit bra ghi sbi nta tae cre sot
Paralog 1 1 2 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03082 [list] [network] ATP-dependent chromatin remodeling (59 genes)
GO BP
GO CC
GO:0000812 [list] [network] Swr1 complex  (7 genes)  IEA  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (50 genes)  IEA  
GO:0042393 [list] [network] histone binding  (61 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (417 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1995 genes)  IEA  
Protein XP_010228385.1 [sequence] [blastp]
XP_014752352.1 [sequence] [blastp]
XP_014752353.1 [sequence] [blastp]
XP_014752355.1 [sequence] [blastp]
XP_014752356.1 [sequence] [blastp]
XP_024313432.1 [sequence] [blastp]
XP_024313433.1 [sequence] [blastp]
XP_024313435.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_010228385.1)
nucl 9  (predict for XP_014752352.1)
nucl 9  (predict for XP_014752353.1)
nucl 8,  cyto 1  (predict for XP_014752355.1)
nucl 8,  cyto 1  (predict for XP_014752356.1)
nucl 9  (predict for XP_024313432.1)
nucl 9  (predict for XP_024313433.1)
nucl 6,  cyto 4  (predict for XP_024313435.1)
Subcellular
localization
TargetP
other 5  (predict for XP_010228385.1)
other 5  (predict for XP_014752352.1)
other 5  (predict for XP_014752353.1)
other 8  (predict for XP_014752355.1)
other 8  (predict for XP_014752356.1)
other 5  (predict for XP_024313432.1)
other 5  (predict for XP_024313433.1)
other 7  (predict for XP_024313435.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100821638
osa-u.5
for
4330371
zma-u.5
for
100216988
zma-u.5
for
103653935
ath-u.5
for
PIE1
gma-u.5
for
100795613
gma-u.5
for
100794898
sly-u.5
for
101248082
vvi-u.5
for
100248703
ppo-u.5
for
18094897
ppo-u.5
for
7478135
mtr-u.5
for
25483514


Ortholog ID: 8454
Species bdi bdi tae tae hvu osa zma zma sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100831848 LOC100821638 LOC123163189 LOC123170204 LOC123407774 LOC4330371 LOC103653935 LOC100216988 LOC8073897 PIE1 LOC100794898 LOC100795613 LOC101248082 LOC103870222 LOC100248703 LOC18094897 LOC7478135 LOC25483514 LOC107928336 LOC107909111 LOC106389841 LOC106452362 LOC102593766 LOC102629545 LOC107780070 LOC107805182 CHLRE_14g618860v5
Function* protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 uncharacterized LOC100216988 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 SNF2 domain-containing protein / helicase domain-containing protein protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 4
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03040 Spliceosome 2
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly03013 Nucleocytoplasmic transport 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr03082 ATP-dependent chromatin remodeling 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03015 mRNA surveillance pathway 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 2
cre03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100831848 100821638 123163189 123170204 123407774 4330371 103653935 100216988 8073897 820463 100794898 100795613 101248082 103870222 100248703 18094897 7478135 25483514 107928336 107909111 106389841 106452362 102593766 102629545 107780070 107805182 5715866
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