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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100823088   pentatricopeptide repeat-containing protein At4g14850 
 tae-r.2   123144017   pentatricopeptide repeat-containing protein At4g14850 
 tae-r.2   123132442   pentatricopeptide repeat-containing protein At4g14850 
 hvu-r.1   123405180   pentatricopeptide repeat-containing protein At4g14850 
 osa-u.5   4350793   pentatricopeptide repeat-containing protein At4g14850 
 sbi-r.1   8081315   pentatricopeptide repeat-containing protein At4g14850 
 ath-u.5   LOI1   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100778632   pentatricopeptide repeat-containing protein At4g14850 
 sly-u.5   101260676   pentatricopeptide repeat-containing protein At4g14850 
 bra-r.6   103868345   pentatricopeptide repeat-containing protein At4g14850 
 vvi-u.5   100261298   pentatricopeptide repeat-containing protein At4g14850 
 mtr-u.5   25485202   pentatricopeptide repeat-containing protein At4g14850 
 mtr-u.5   11431827   pentatricopeptide repeat-containing protein At4g14850 
 ghi-r.1   107955636   pentatricopeptide repeat-containing protein At4g14850 
 ghi-r.1   107954871   pentatricopeptide repeat-containing protein At4g14850 
 bna-r.1   106406122   pentatricopeptide repeat-containing protein At4g14850-like 
 bna-r.1   106402954   pentatricopeptide repeat-containing protein At4g14850-like 
 bna-r.1   106411027   pentatricopeptide repeat-containing protein At4g14850 
 sot-r.1   102578590   pentatricopeptide repeat-containing protein At4g14850 
 cit-r.1   102608673   pentatricopeptide repeat-containing protein At4g14850 
 nta-r.1   107796050   pentatricopeptide repeat-containing protein At4g14850-like 
 nta-r.1   107767133   pentatricopeptide repeat-containing protein At4g14850-like 

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Top 50 coexpressed genes to 100823088 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100823088 (bdi-r.1 coexpression data)

CoexMap"100823088"


bdiLOC100823088 | Entrez gene ID : 100823088      
Species bdi tae hvu osa sbi ath gma sly bra vvi mtr ghi bna sot cit nta ppo zma cre
Paralog 1 2 1 1 1 1 1 1 1 1 2 2 3 1 1 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (707 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003575959.1 [sequence] [blastp]
XP_024310611.1 [sequence] [blastp]
XP_024310612.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 3,  cyto 2,  chlo 1,  mito 1,  pero 1,  chlo_mito 1,  E.R._vacu 1,  cyto_plas 1  (predict for XP_003575959.1)
E.R. 3,  cyto 2,  chlo 1,  mito 1,  pero 1,  chlo_mito 1,  E.R._vacu 1,  cyto_plas 1  (predict for XP_024310611.1)
E.R. 3,  cyto 2,  chlo 1,  mito 1,  pero 1,  chlo_mito 1,  E.R._vacu 1,  cyto_plas 1  (predict for XP_024310612.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_003575959.1)
chlo 3  (predict for XP_024310611.1)
chlo 3  (predict for XP_024310612.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100823088
tae-r.2
for
123144017
tae-r.2
for
123132442
hvu-r.1
for
123405180
osa-u.5
for
4350793
sbi-r.1
for
8081315
ath-u.5
for
LOI1
gma-u.5
for
100778632
sly-u.5
for
101260676
bra-r.6
for
103868345
vvi-u.5
for
100261298
mtr-u.5
for
25485202
mtr-u.5
for
11431827
ghi-r.1
for
107955636
ghi-r.1
for
107954871
bna-r.1
for
106406122
bna-r.1
for
106402954
bna-r.1
for
106411027
sot-r.1
for
102578590
cit-r.1
for
102608673
nta-r.1
for
107796050
nta-r.1
for
107767133


Ortholog ID: 10854
Species bdi tae tae hvu osa sbi ath gma sly bra vvi mtr mtr ghi ghi bna bna bna sot cit nta nta
Symbol LOC100823088 LOC123144017 LOC123132442 LOC123405180 LOC4350793 LOC8081315 LOI1 LOC100778632 LOC101260676 LOC103868345 LOC100261298 LOC25485202 LOC11431827 LOC107955636 LOC107954871 LOC106406122 LOC106402954 LOC106411027 LOC102578590 LOC102608673 LOC107796050 LOC107767133
Function* pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit03020 RNA polymerase 2
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100823088 123144017 123132442 123405180 4350793 8081315 827142 100778632 101260676 103868345 100261298 25485202 11431827 107955636 107954871 106406122 106402954 106411027 102578590 102608673 107796050 107767133
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