Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100824400   pentatricopeptide repeat-containing protein At1g08610 
 tae-r.2   123181067   pentatricopeptide repeat-containing protein At1g08610 
 tae-r.2   123121239   pentatricopeptide repeat-containing protein At1g08610 
 tae-r.2   123045532   pentatricopeptide repeat-containing protein At1g08610 
 hvu-r.1   123431012   pentatricopeptide repeat-containing protein At1g08610-like 
 osa-u.5   4348896   pentatricopeptide repeat-containing protein At1g08610 
 zma-u.5   100381779   Pentatricopeptide repeat-containing protein 
 sbi-r.1   8067422   pentatricopeptide repeat-containing protein At1g08610 
 ath-u.5   AT1G08610   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100813082   pentatricopeptide repeat-containing protein At1g08610 
 sly-u.5   101246044   pentatricopeptide repeat-containing protein 
 bra-r.6   103843389   pentatricopeptide repeat-containing protein At1g08610 
 vvi-u.5   100260357   pentatricopeptide repeat-containing protein At1g08610 
 ppo-u.5   7465943   pentatricopeptide repeat-containing protein At1g08610 
 mtr-u.5   11426390   pentatricopeptide repeat-containing protein At1g08610 
 ghi-r.1   107936807   pentatricopeptide repeat-containing protein At1g08610 
 ghi-r.1   107926840   pentatricopeptide repeat-containing protein At1g08610 
 ghi-r.1   107893189   pentatricopeptide repeat-containing protein At1g08610 
 bna-r.1   106419817   pentatricopeptide repeat-containing protein At1g08610-like 
 bna-r.1   106377027   pentatricopeptide repeat-containing protein At1g08610-like 
 sot-r.1   102585775   pentatricopeptide repeat-containing protein At1g08610 
 cit-r.1   102607878   pentatricopeptide repeat-containing protein At1g08610 
 nta-r.1   107822700   uncharacterized LOC107822700 
 nta-r.1   107809622   uncharacterized LOC107809622 

close


Top 50 coexpressed genes to 100824400 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100824400 (bdi-r.1 coexpression data)

CoexMap"100824400"


bdiLOC100824400 | Entrez gene ID : 100824400      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 1 1 1 1 1 1 3 2 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_010234820.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  extr 1  (predict for XP_010234820.1)
Subcellular
localization
TargetP
mito 4,  chlo 3  (predict for XP_010234820.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100824400
tae-r.2
for
123181067
tae-r.2
for
123121239
tae-r.2
for
123045532
hvu-r.1
for
123431012
osa-u.5
for
4348896
zma-u.5
for
100381779
sbi-r.1
for
8067422
ath-u.5
for
AT1G08610
gma-u.5
for
100813082
sly-u.5
for
101246044
bra-r.6
for
103843389
vvi-u.5
for
100260357
ppo-u.5
for
7465943
mtr-u.5
for
11426390
ghi-r.1
for
107936807
ghi-r.1
for
107926840
ghi-r.1
for
107893189
bna-r.1
for
106419817
bna-r.1
for
106377027
sot-r.1
for
102585775
cit-r.1
for
102607878
nta-r.1
for
107822700
nta-r.1
for
107809622


Ortholog ID: 10437
Species bdi tae tae tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi ghi ghi bna bna sot cit nta nta
Symbol LOC100824400 LOC123181067 LOC123121239 LOC123045532 LOC123431012 LOC4348896 LOC100381779 LOC8067422 AT1G08610 LOC100813082 LOC101246044 LOC103843389 LOC100260357 LOC7465943 LOC11426390 LOC107936807 LOC107926840 LOC107893189 LOC106419817 LOC106377027 LOC102585775 LOC102607878 LOC107822700 LOC107809622
Function* pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610-like pentatricopeptide repeat-containing protein At1g08610 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g08610 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610-like pentatricopeptide repeat-containing protein At1g08610-like pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 uncharacterized LOC107822700 uncharacterized LOC107809622
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03013 Nucleocytoplasmic transport 2
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100824400 123181067 123121239 123045532 123431012 4348896 100381779 8067422 837383 100813082 101246044 103843389 100260357 7465943 11426390 107936807 107926840 107893189 106419817 106377027 102585775 102607878 107822700 107809622
The preparation time of this page was 0.1 [sec].