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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7465943   pentatricopeptide repeat-containing protein At1g08610 
 ppo-r.4   7465943   pentatricopeptide repeat-containing protein At1g08610 
 ppo-m.4   7465943   pentatricopeptide repeat-containing protein At1g08610 
 gma-u.5   100813082   pentatricopeptide repeat-containing protein At1g08610 
 mtr-u.5   11426390   pentatricopeptide repeat-containing protein At1g08610 
 ath-u.5   AT1G08610   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100260357   pentatricopeptide repeat-containing protein At1g08610 
 sly-u.5   101246044   pentatricopeptide repeat-containing protein 
 osa-u.5   4348896   pentatricopeptide repeat-containing protein At1g08610 
 zma-u.5   100381779   Pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 7465943 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7465943 (ppo-u.5 coexpression data)

CoexMap"7465943"


ppoLOC7465943 | Entrez gene ID : 7465943    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002325338.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002325338.4)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for XP_002325338.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7465943

.
ppo-r.4
for
7465943

.
ppo-m.4
for
7465943

.
gma-u.5
for
100813082

.
mtr-u.5
for
11426390

.
ath-u.5
for
AT1G08610

.
vvi-u.5
for
100260357

.
sly-u.5
for
101246044

.
osa-u.5
for
4348896

.
zma-u.5
for
100381779

.


Ortholog ID: 10437
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G08610 LOC100813082 LOC101246044 LOC4348896 LOC100381779 LOC103843389 LOC100260357 LOC7465943 LOC11426390 LOC123181067 LOC123121239 LOC123431012 LOC107936807 LOC107926840 LOC106377027 LOC106419817 LOC8067422 LOC102585775 LOC102607878 LOC100824400 LOC107809622 LOC107822700
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g08610 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610-like pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610-like pentatricopeptide repeat-containing protein At1g08610-like pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 pentatricopeptide repeat-containing protein At1g08610 uncharacterized LOC107809622 uncharacterized LOC107822700
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03013 Nucleocytoplasmic transport 2
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837383 100813082 101246044 4348896 100381779 103843389 100260357 7465943 11426390 123181067 123121239 123431012 107936807 107926840 106377027 106419817 8067422 102585775 102607878 100824400 107809622 107822700
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