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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100824613   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 tae-r.2   123145097   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 tae-r.2   123128002   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 hvu-r.1   123404313   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 osa-u.5   4330315   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 zma-u.5   103627548   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 gma-u.5   100808784   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 gma-u.5   100306721   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 sly-u.5   101259825   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 bra-r.6   103831950   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 vvi-u.5   100263983   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 ppo-u.5   7474869   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 mtr-u.5   25489574   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 ghi-r.1   107937670   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 ghi-r.1   107962368   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 sot-r.1   102578290   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 cit-r.1   102616099   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 nta-r.1   107786106   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 

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Top 50 coexpressed genes to 100824613 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100824613 (bdi-r.1 coexpression data)

CoexMap"100824613"


bdiLOC100824613 | Entrez gene ID : 100824613      
Species bdi tae hvu osa zma gma sly bra vvi ppo mtr ghi sot cit nta bna cre sbi ath
Paralog 1 2 1 1 1 2 1 1 1 1 1 2 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003572818.1 [sequence] [blastp]
XP_014755798.1 [sequence] [blastp]
XP_014755799.1 [sequence] [blastp]
XP_024316469.1 [sequence] [blastp]
XP_024316470.1 [sequence] [blastp]
XP_024316471.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_003572818.1)
chlo 9  (predict for XP_014755798.1)
chlo 9  (predict for XP_014755799.1)
chlo 9  (predict for XP_024316469.1)
chlo 9  (predict for XP_024316470.1)
chlo 9  (predict for XP_024316471.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_003572818.1)
chlo 6  (predict for XP_014755798.1)
chlo 6  (predict for XP_014755799.1)
chlo 6  (predict for XP_024316469.1)
chlo 6  (predict for XP_024316470.1)
chlo 6  (predict for XP_024316471.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100824613
tae-r.2
for
123145097
tae-r.2
for
123128002
hvu-r.1
for
123404313
osa-u.5
for
4330315
zma-u.5
for
103627548
gma-u.5
for
100808784
gma-u.5
for
100306721
sly-u.5
for
101259825
bra-r.6
for
103831950
vvi-u.5
for
100263983
ppo-u.5
for
7474869
mtr-u.5
for
25489574
ghi-r.1
for
107937670
ghi-r.1
for
107962368
sot-r.1
for
102578290
cit-r.1
for
102616099
nta-r.1
for
107786106


Ortholog ID: 11804
Species bdi tae tae hvu osa zma gma gma sly bra vvi ppo mtr ghi ghi sot cit nta
Symbol LOC100824613 LOC123145097 LOC123128002 LOC123404313 LOC4330315 LOC103627548 LOC100808784 LOC100306721 LOC101259825 LOC103831950 LOC100263983 LOC7474869 LOC25489574 LOC107937670 LOC107962368 LOC102578290 LOC102616099 LOC107786106
Function* pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 2
tae03420 Nucleotide excision repair 2
tae03430 Mismatch repair 2
tae03440 Homologous recombination 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 2
bra03250 Viral life cycle - HIV-1 2
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit00561 Glycerolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100824613 123145097 123128002 123404313 4330315 103627548 100808784 100306721 101259825 103831950 100263983 7474869 25489574 107937670 107962368 102578290 102616099 107786106
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