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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107962368   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 gma-u.5   100808784   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 gma-u.5   100306721   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 vvi-u.5   100263983   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 ppo-u.5   7474869   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 mtr-u.5   25489574   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 sly-u.5   101259825   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 osa-u.5   4330315   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 
 zma-u.5   103627548   pentatricopeptide repeat-containing protein At1g74900, mitochondrial 

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Top 50 coexpressed genes to 107962368 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107962368 (ghi-r.1 coexpression data)

CoexMap"107962368"


ghiLOC107962368 | Entrez gene ID : 107962368    
Species ghi gma vvi ppo mtr sly osa zma bdi hvu bra cit bna ath sbi sot nta cre tae
Paralog 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016754205.2 [sequence] [blastp]
XP_016754206.2 [sequence] [blastp]
XP_016754207.2 [sequence] [blastp]
XP_016754208.2 [sequence] [blastp]
XP_016754209.2 [sequence] [blastp]
XP_016754210.2 [sequence] [blastp]
XP_040952073.1 [sequence] [blastp]
XP_040952074.1 [sequence] [blastp]
XP_040952075.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  chlo_mito 3  (predict for XP_016754205.2)
chlo 4,  cyto 3,  chlo_mito 3  (predict for XP_016754206.2)
chlo 4,  cyto 3,  chlo_mito 3  (predict for XP_016754207.2)
chlo 4,  cyto 3,  chlo_mito 3  (predict for XP_016754208.2)
chlo 4,  cyto 3,  chlo_mito 3  (predict for XP_016754209.2)
chlo 4,  cyto 3,  chlo_mito 3  (predict for XP_016754210.2)
chlo 4,  cyto 3,  chlo_mito 3  (predict for XP_040952073.1)
nucl 8,  cyto 1,  mito 1,  extr 1  (predict for XP_040952074.1)
nucl 8,  cyto 1,  mito 1,  extr 1  (predict for XP_040952075.1)
Subcellular
localization
TargetP
chlo 7,  other 4  (predict for XP_016754205.2)
chlo 7,  other 4  (predict for XP_016754206.2)
chlo 7,  other 4  (predict for XP_016754207.2)
chlo 7,  other 4  (predict for XP_016754208.2)
chlo 7,  other 4  (predict for XP_016754209.2)
chlo 7,  other 4  (predict for XP_016754210.2)
chlo 7,  other 4  (predict for XP_040952073.1)
chlo 9  (predict for XP_040952074.1)
chlo 9  (predict for XP_040952075.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107962368
gma-u.5
for
100808784
gma-u.5
for
100306721
vvi-u.5
for
100263983
ppo-u.5
for
7474869
mtr-u.5
for
25489574
sly-u.5
for
101259825
osa-u.5
for
4330315
zma-u.5
for
103627548


Ortholog ID: 11804
Species ghi ghi bra cit gma gma vvi ppo mtr sly sot nta osa zma tae tae hvu bdi
Symbol LOC107962368 LOC107937670 LOC103831950 LOC102616099 LOC100306721 LOC100808784 LOC100263983 LOC7474869 LOC25489574 LOC101259825 LOC102578290 LOC107786106 LOC4330315 LOC103627548 LOC123145097 LOC123128002 LOC123404313 LOC100824613
Function* pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial pentatricopeptide repeat-containing protein At1g74900, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 2
bra03250 Viral life cycle - HIV-1 2
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 2
tae03420 Nucleotide excision repair 2
tae03430 Mismatch repair 2
tae03440 Homologous recombination 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107962368 107937670 103831950 102616099 100306721 100808784 100263983 7474869 25489574 101259825 102578290 107786106 4330315 103627548 123145097 123128002 123404313 100824613
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