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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100825276   U-box domain-containing protein 39 
 tae-r.2   123165193   U-box domain-containing protein 39 
 tae-r.2   123162339   U-box domain-containing protein 39 
 tae-r.2   123152078   U-box domain-containing protein 41-like 
 hvu-r.1   123409895   U-box domain-containing protein 40 
 osa-u.5   107276525   U-box domain-containing protein 39 
 osa-u.5   4340611   U-box domain-containing protein 39 
 zma-u.5   103637803   U-box domain-containing protein 39 
 sbi-r.1   8065702   U-box domain-containing protein 39 
 ath-u.5   PUB39   PLANT U-BOX 39 
 ath-u.5   AT5G40140   RING/U-box superfamily protein with ARM repeat domain-containing protein 
 ath-u.5   AT5G62560   RING/U-box superfamily protein with ARM repeat domain-containing protein 
 gma-u.5   100798675   U-box domain-containing protein 40 
 gma-u.5   100784564   U-box domain-containing protein 38 
 gma-u.5   100815075   U-box domain-containing protein 38 
 sly-u.5   101258053   U-box domain-containing protein 38 
 sly-u.5   101243948   U-box domain-containing protein 40 
 bra-r.6   103873200   U-box domain-containing protein 39 
 bra-r.6   103855018   U-box domain-containing protein 41 
 bra-r.6   103855284   U-box domain-containing protein 38 
 vvi-u.5   100255877   U-box domain-containing protein 40 
 vvi-u.5   100244998   U-box domain-containing protein 38 
 ppo-u.5   7453750   U-box domain-containing protein 38 
 ppo-u.5   7458016   U-box domain-containing protein 38 
 mtr-u.5   25489555   U-box domain-containing protein 38 
 mtr-u.5   11434906   U-box domain-containing protein 40 
 ghi-r.1   107958591   U-box domain-containing protein 40 
 ghi-r.1   107894527   U-box domain-containing protein 38 
 ghi-r.1   107955571   U-box domain-containing protein 40 
 bna-r.1   125601723   U-box domain-containing protein 41-like 
 bna-r.1   125588885   U-box domain-containing protein 38-like 
 bna-r.1   125581596   U-box domain-containing protein 38-like 
 sot-r.1   102580324   U-box domain-containing protein 40 
 sot-r.1   102582496   U-box domain-containing protein 38-like 
 cit-r.1   102627264   U-box domain-containing protein 38-like 
 cit-r.1   102630257   U-box domain-containing protein 40 
 nta-r.1   107811564   U-box domain-containing protein 40-like 
 nta-r.1   107759271   U-box domain-containing protein 40 
 nta-r.1   107765884   U-box domain-containing protein 40-like 

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Top 50 coexpressed genes to 100825276 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100825276 (bdi-r.1 coexpression data)

CoexMap"100825276"


bdiLOC100825276 | Entrez gene ID : 100825276      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 2 1 1 3 3 2 3 2 2 2 3 3 2 2 3 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (411 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4615 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (329 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003564022.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_003564022.1)
Subcellular
localization
TargetP
mito 7,  chlo 4  (predict for XP_003564022.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100825276
tae-r.2
for
123165193
tae-r.2
for
123162339
tae-r.2
for
123152078
hvu-r.1
for
123409895
osa-u.5
for
107276525
osa-u.5
for
4340611
zma-u.5
for
103637803
sbi-r.1
for
8065702
ath-u.5
for
PUB39
ath-u.5
for
AT5G40140
ath-u.5
for
AT5G62560
gma-u.5
for
100798675
gma-u.5
for
100784564
gma-u.5
for
100815075
sly-u.5
for
101258053
sly-u.5
for
101243948
bra-r.6
for
103873200
bra-r.6
for
103855018
bra-r.6
for
103855284
vvi-u.5
for
100255877
vvi-u.5
for
100244998
ppo-u.5
for
7453750
ppo-u.5
for
7458016
mtr-u.5
for
25489555
mtr-u.5
for
11434906
ghi-r.1
for
107958591
ghi-r.1
for
107894527
ghi-r.1
for
107955571
bna-r.1
for
125601723
bna-r.1
for
125588885
bna-r.1
for
125581596
sot-r.1
for
102580324
sot-r.1
for
102582496
cit-r.1
for
102627264
cit-r.1
for
102630257
nta-r.1
for
107811564
nta-r.1
for
107759271
nta-r.1
for
107765884


Ortholog ID: 2734
Species bdi tae tae tae hvu osa osa zma sbi ath ath ath gma gma gma sly sly bra bra bra vvi vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit cit nta nta nta
Symbol LOC100825276 LOC123165193 LOC123162339 LOC123152078 LOC123409895 LOC107276525 LOC4340611 LOC103637803 LOC8065702 PUB39 AT5G62560 PUB38 LOC100798675 LOC100784564 LOC100775869 LOC101258053 LOC101243948 LOC103873200 LOC103855018 LOC103863953 LOC100255877 LOC100244998 LOC7453750 LOC7458016 LOC25489555 LOC11434906 LOC107958591 LOC107955571 LOC107899126 LOC125581596 LOC106446129 LOC106382884 LOC102580324 LOC102582496 LOC102627264 LOC102630257 LOC107765884 LOC107791007 LOC107794293
Function* U-box domain-containing protein 39 U-box domain-containing protein 39 U-box domain-containing protein 39 U-box domain-containing protein 41-like U-box domain-containing protein 40 U-box domain-containing protein 39 U-box domain-containing protein 39 U-box domain-containing protein 39 U-box domain-containing protein 39 PLANT U-BOX 39 RING/U-box superfamily protein with ARM repeat domain-containing protein plant U-box 38 U-box domain-containing protein 40 U-box domain-containing protein 38 U-box domain-containing protein 40 U-box domain-containing protein 38 U-box domain-containing protein 40 U-box domain-containing protein 39 U-box domain-containing protein 41 U-box domain-containing protein 40 U-box domain-containing protein 40 U-box domain-containing protein 38 U-box domain-containing protein 38 U-box domain-containing protein 38 U-box domain-containing protein 38 U-box domain-containing protein 40 U-box domain-containing protein 40 U-box domain-containing protein 40 U-box domain-containing protein 38 U-box domain-containing protein 38-like U-box domain-containing protein 40-like U-box domain-containing protein 38 U-box domain-containing protein 40 U-box domain-containing protein 38-like U-box domain-containing protein 38-like U-box domain-containing protein 40 U-box domain-containing protein 40-like U-box domain-containing protein 40-like U-box domain-containing protein 40-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04070 Phosphatidylinositol signaling system 3
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 3
hvu04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 8
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03272 Virion - Hepatitis viruses 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100825276 123165193 123162339 123152078 123409895 107276525 4340611 103637803 8065702 823936 836376 836643 100798675 100784564 100775869 101258053 101243948 103873200 103855018 103863953 100255877 100244998 7453750 7458016 25489555 11434906 107958591 107955571 107899126 125581596 106446129 106382884 102580324 102582496 102627264 102630257 107765884 107791007 107794293
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