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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100825281   putative pentatricopeptide repeat-containing protein At1g56570 
 osa-u.5   107277521   putative pentatricopeptide repeat-containing protein At1g56570 
 ath-u.5   PGN   Tetratricopeptide repeat (TPR)-like superfamily protein 
 sly-u.5   101248822   putative pentatricopeptide repeat-containing protein At1g56570 
 bra-r.6   103838678   putative pentatricopeptide repeat-containing protein At1g56570 
 mtr-u.5   11413612   putative pentatricopeptide repeat-containing protein At1g56570 
 ghi-r.1   107927191   putative pentatricopeptide repeat-containing protein At1g56570 
 ghi-r.1   107886410   putative pentatricopeptide repeat-containing protein At1g56570 
 sot-r.1   102588331   putative pentatricopeptide repeat-containing protein At1g56570 
 cit-r.1   102606742   putative pentatricopeptide repeat-containing protein At1g56570 
 nta-r.1   107778981   putative pentatricopeptide repeat-containing protein At1g56570 
 nta-r.1   107805917   putative pentatricopeptide repeat-containing protein At1g56570 

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Top 50 coexpressed genes to 100825281 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100825281 (bdi-r.1 coexpression data)

CoexMap"100825281"


bdiLOC100825281 | Entrez gene ID : 100825281      
Species bdi osa ath sly bra mtr ghi sot cit nta vvi ppo tae zma hvu sbi cre gma bna
Paralog 1 1 1 1 1 1 2 1 1 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (707 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003565697.3 [sequence] [blastp]
XP_024315020.1 [sequence] [blastp]
XP_024315021.1 [sequence] [blastp]
XP_024315022.1 [sequence] [blastp]
XP_024315023.1 [sequence] [blastp]
XP_024315024.1 [sequence] [blastp]
XP_024315025.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_003565697.3)
chlo 6,  mito 4  (predict for XP_024315020.1)
chlo 6,  mito 4  (predict for XP_024315021.1)
chlo 6,  mito 4  (predict for XP_024315022.1)
chlo 6,  mito 4  (predict for XP_024315023.1)
chlo 6,  mito 4  (predict for XP_024315024.1)
chlo 6,  mito 4  (predict for XP_024315025.1)
Subcellular
localization
TargetP
other 4  (predict for XP_003565697.3)
other 4  (predict for XP_024315020.1)
other 4  (predict for XP_024315021.1)
other 4  (predict for XP_024315022.1)
other 4  (predict for XP_024315023.1)
other 4  (predict for XP_024315024.1)
other 4  (predict for XP_024315025.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100825281
osa-u.5
for
107277521
ath-u.5
for
PGN
sly-u.5
for
101248822
bra-r.6
for
103838678
mtr-u.5
for
11413612
ghi-r.1
for
107927191
ghi-r.1
for
107886410
sot-r.1
for
102588331
cit-r.1
for
102606742
nta-r.1
for
107778981
nta-r.1
for
107805917


Ortholog ID: 12702
Species bdi osa ath sly bra mtr ghi ghi sot cit nta nta
Symbol LOC100825281 LOC107277521 PGN LOC101248822 LOC103838678 LOC11413612 LOC107927191 LOC107886410 LOC102588331 LOC102606742 LOC107778981 LOC107805917
Function* putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100825281 107277521 842111 101248822 103838678 11413612 107927191 107886410 102588331 102606742 107778981 107805917
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