Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107778981   putative pentatricopeptide repeat-containing protein At1g56570 
 nta-r.1   107805917   putative pentatricopeptide repeat-containing protein At1g56570 
 sly-u.5   101248822   putative pentatricopeptide repeat-containing protein At1g56570 
 sot-r.1   102588331   putative pentatricopeptide repeat-containing protein At1g56570 
 ath-u.5   PGN   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103838678   putative pentatricopeptide repeat-containing protein At1g56570 
 mtr-u.5   11413612   putative pentatricopeptide repeat-containing protein At1g56570 
 ghi-r.1   107886410   putative pentatricopeptide repeat-containing protein At1g56570 
 ghi-r.1   107927191   putative pentatricopeptide repeat-containing protein At1g56570 
 cit-r.1   102606742   putative pentatricopeptide repeat-containing protein At1g56570 
 osa-u.5   107277521   putative pentatricopeptide repeat-containing protein At1g56570 
 bdi-r.1   100825281   putative pentatricopeptide repeat-containing protein At1g56570 

close


Top 50 coexpressed genes to 107778981 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107778981 (nta-r.1 coexpression data)

CoexMap"107778981"


ntaLOC107778981 | Entrez gene ID : 107778981    
Species nta sly sot ath bra mtr ghi cit osa bdi gma zma cre ppo sbi tae bna hvu vvi
Paralog 2 1 1 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016454798.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  E.R. 1  (predict for XP_016454798.1)
Subcellular
localization
TargetP
mito 6,  chlo 3  (predict for XP_016454798.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107778981
nta-r.1
for
107805917
sly-u.5
for
101248822
sot-r.1
for
102588331
ath-u.5
for
PGN
bra-r.6
for
103838678
mtr-u.5
for
11413612
ghi-r.1
for
107886410
ghi-r.1
for
107927191
cit-r.1
for
102606742
osa-u.5
for
107277521
bdi-r.1
for
100825281


Ortholog ID: 12702
Species nta nta sly sot ath bra mtr ghi ghi cit osa bdi
Symbol LOC107778981 LOC107805917 LOC101248822 LOC102588331 PGN LOC103838678 LOC11413612 LOC107886410 LOC107927191 LOC102606742 LOC107277521 LOC100825281
Function* putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107778981 107805917 101248822 102588331 842111 103838678 11413612 107886410 107927191 102606742 107277521 100825281
The preparation time of this page was 0.1 [sec].