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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100825292   probable homogentisate phytyltransferase 2, chloroplastic 
 osa-u.5   4343702   probable homogentisate phytyltransferase 2, chloroplastic 
 zma-u.5   100280305   uncharacterized LOC100280305 
 ath-u.5   HST   homogentisate prenyltransferase 
 gma-u.5   VTE2-2   homogentisate phytyltransferase VTE2-2 
 gma-u.5   106794098   homogentisate solanesyltransferase, chloroplastic 
 sly-u.5   101261100   homogentisate solanesyltransferase, chloroplastic 
 vvi-u.5   100264108   homogentisate solanesyltransferase, chloroplastic 
 ppo-u.5   7479502   homogentisate solanesyltransferase, chloroplastic 
 mtr-u.5   25483545   homogentisate solanesyltransferase, chloroplastic 

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Top 50 coexpressed genes to 100825292 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100825292 (bdi-r.1 coexpression data)

CoexMap"100825292"


bdiLOC100825292 | Entrez gene ID : 100825292      
Species bdi osa zma ath gma sly vvi ppo mtr hvu bna cit bra ghi sbi nta tae cre sot
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (48 genes)
bdi01240 [list] [network] Biosynthesis of cofactors (240 genes)
GO BP
GO CC
GO:0016020 [list] [network] membrane  (3014 genes)  IEA  
GO MF
GO:0004659 [list] [network] prenyltransferase activity  (30 genes)  IEA  
Protein XP_003567992.1 [sequence] [blastp]
XP_010231091.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  plas 4  (predict for XP_003567992.1)
chlo 6,  plas 4  (predict for XP_010231091.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003567992.1)
chlo 9  (predict for XP_010231091.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100825292
osa-u.5
for
4343702
zma-u.5
for
100280305
ath-u.5
for
HST
gma-u.5
for
VTE2-2
gma-u.5
for
106794098
sly-u.5
for
101261100
vvi-u.5
for
100264108
ppo-u.5
for
7479502
mtr-u.5
for
25483545


Ortholog ID: 8788
Species bdi tae tae hvu osa zma sbi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100825292 LOC123065273 LOC123142883 LOC123448160 LOC4343702 LOC100280305 LOC8055688 HST LOC106794098 VTE2-2 LOC101261100 LOC103870296 LOC103859421 LOC100264108 LOC7479502 LOC25483545 LOC107891223 LOC107889470 LOC106452511 LOC106401877 LOC102594989 LOC102623177 LOC107817989 LOC107825180 CHLRE_06g283750v5
Function* probable homogentisate phytyltransferase 2, chloroplastic probable homogentisate phytyltransferase 2, chloroplastic probable homogentisate phytyltransferase 2, chloroplastic probable homogentisate phytyltransferase 2, chloroplastic probable homogentisate phytyltransferase 2, chloroplastic uncharacterized LOC100280305 probable homogentisate phytyltransferase 2, chloroplastic homogentisate prenyltransferase homogentisate solanesyltransferase, chloroplastic homogentisate phytyltransferase VTE2-2 homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic-like homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 4
bdi00010 Glycolysis / Gluconeogenesis 2
bdi01200 Carbon metabolism 2
bdi00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 4
osa00710 Carbon fixation by Calvin cycle 3
osa01230 Biosynthesis of amino acids 2
osa00010 Glycolysis / Gluconeogenesis 2
osa00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 3
sbi01240 Biosynthesis of cofactors 3
sbi00051 Fructose and mannose metabolism 2
sbi00330 Arginine and proline metabolism 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath01230 Biosynthesis of amino acids 3
ath01240 Biosynthesis of cofactors 3
ath00910 Nitrogen metabolism 3
ath00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 4
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly01200 Carbon metabolism 3
sly00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra00710 Carbon fixation by Calvin cycle 3
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bra01240 Biosynthesis of cofactors 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi01240 Biosynthesis of cofactors 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 3
mtr01200 Carbon metabolism 3
mtr01240 Biosynthesis of cofactors 3
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
ghi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00230 Purine metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot00010 Glycolysis / Gluconeogenesis 3
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta00450 Selenocompound metabolism 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta00900 Terpenoid backbone biosynthesis 2
nta00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 3
cre00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100825292 123065273 123142883 123448160 4343702 100280305 8055688 5007993 106794098 732619 101261100 103870296 103859421 100264108 7479502 25483545 107891223 107889470 106452511 106401877 102594989 102623177 107817989 107825180 5720967
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