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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100826905   SKP1-like protein 1 
 bdi-r.1   100843377   SKP1-like protein 1 
 bdi-r.1   100835363   SKP1-like protein 1 
 bdi-r.1   100837999   SKP1-like protein 1 
 tae-r.2   123165315   SKP1-like protein 1 
 tae-r.2   123149828   SKP1-like protein 1 
 osa-u.5   9270098   SKP1-like protein 1 
 osa-u.5   4347721   SKP1-like protein 20 
 zma-u.5   100283299   uncharacteriized LOC100283299 
 zma-u.5   100282249   SKP1-like protein 1B 
 zma-u.5   100280388   uncharacterized LOC100280388 
 sbi-r.1   110433716   SKP1-like protein 1A 
 sbi-r.1   8064413   SKP1-like protein 1A 
 sbi-r.1   8074154   SKP1-like protein 1A 
 ath-u.5   SK4   SKP1-like 4 
 ath-u.5   SKP1   S phase kinase-associated protein 1 
 ath-u.5   SK18   E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein 
 gma-u.5   100809769   SKP1-like protein 1A 
 gma-u.5   100527683   SKP1-like protein 
 gma-u.5   100306458   uncharacterized LOC100306458 
 sly-u.5   101243954   SKP1-like protein 1A 
 bra-r.6   103830630   SKP1-like protein 1A 
 ppo-u.5   7485611   SKP1-like protein 1B 
 ppo-u.5   7470408   SKP1-like protein 1A 
 ppo-u.5   18099152   SKP1-like protein 1B 
 mtr-u.5   11418787   SKP1-like protein 1 
 ghi-r.1   107943505   SKP1-like protein 1B 
 ghi-r.1   107909473   SKP1-like protein 1B 
 ghi-r.1   107922577   SKP1-like protein 1A 
 bna-r.1   106379807   SKP1-like protein 13 
 bna-r.1   106433691   SKP1-like protein 4 
 bna-r.1   106424965   SKP1-like protein 1A 
 sot-r.1   102591070   SKP1-like protein 1B 
 sot-r.1   102592290   SKP1-like protein 1B 
 sot-r.1   102596071   SKP1-like protein 1B 
 cit-r.1   102615892   SKP1-like protein 1B 
 cit-r.1   102625199   SKP1-like protein 1B 
 nta-r.1   142173254   SKP1-like protein 1A 
 nta-r.1   142173252   SKP1-like protein 1A 
 nta-r.1   107812884   SKP1-like protein 1A 
 cre-r.1   CHLRE_12g501200v5   uncharacterized protein 

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Top 50 coexpressed genes to 100826905 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100826905 (bdi-r.1 coexpression data)

CoexMap"100826905"


bdiLOC100826905 | Entrez gene ID : 100826905      
Species bdi tae osa zma sbi ath gma sly bra ppo mtr ghi bna sot cit nta cre hvu vvi
Paralog 4 2 2 3 3 3 3 1 1 3 1 3 3 3 2 3 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03083 [list] [network] Polycomb repressive complex (64 genes)
bdi04120 [list] [network] Ubiquitin mediated proteolysis (156 genes)
bdi04141 [list] [network] Protein processing in endoplasmic reticulum (196 genes)
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (62 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4615 genes)  IEA  
GO MF
GO:0097602 [list] [network] cullin family protein binding  (20 genes)  IEA  
Protein XP_003577587.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 7,  cyto 1,  pero 1,  cysk_nucl 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_003577587.1)
Subcellular
localization
TargetP
other 9  (predict for XP_003577587.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100826905
bdi-r.1
for
100843377
bdi-r.1
for
100835363
bdi-r.1
for
100837999
tae-r.2
for
123165315
tae-r.2
for
123149828
osa-u.5
for
9270098
osa-u.5
for
4347721
zma-u.5
for
100283299
zma-u.5
for
100282249
zma-u.5
for
100280388
sbi-r.1
for
110433716
sbi-r.1
for
8064413
sbi-r.1
for
8074154
ath-u.5
for
SK4
ath-u.5
for
SKP1
ath-u.5
for
SK18
gma-u.5
for
100809769
gma-u.5
for
100527683
gma-u.5
for
100306458
sly-u.5
for
101243954
bra-r.6
for
103830630
ppo-u.5
for
7485611
ppo-u.5
for
7470408
ppo-u.5
for
18099152
mtr-u.5
for
11418787
ghi-r.1
for
107943505
ghi-r.1
for
107909473
ghi-r.1
for
107922577
bna-r.1
for
106379807
bna-r.1
for
106433691
bna-r.1
for
106424965
sot-r.1
for
102591070
sot-r.1
for
102592290
sot-r.1
for
102596071
cit-r.1
for
102615892
cit-r.1
for
102625199
nta-r.1
for
142173254
nta-r.1
for
142173252
nta-r.1
for
107812884
cre-r.1
for
CHLRE_12g501200v5


Ortholog ID: 252
Species bdi bdi bdi tae osa osa zma zma zma sbi sbi sbi gma gma gma sly sly sly bra bra bra vvi ppo ppo ghi ghi ghi bna bna sot sot cit cit nta nta nta cre
Symbol LOC100826905 LOC100835363 LOC100845615 LOC123149828 LOC9270098 LOC4347721 LOC100282249 LOC100280388 LOC100193107 LOC8064413 LOC8063324 LOC8075674 LOC100809769 LOC100527683 LOC100306458 LOC101243954 LOC101246287 LOC101268040 LOC103830630 LOC103872814 LOC103852996 LOC100252349 LOC7485611 LOC7470408 LOC107943505 LOC107909473 LOC107938152 LOC106379807 LOC106347076 LOC102592290 LOC102601988 LOC102615892 LOC102625199 LOC107812884 LOC107786549 LOC107761682 CHLRE_12g501200v5
Function* SKP1-like protein 1 SKP1-like protein 1 SKP1-like protein 1 SKP1-like protein 1 SKP1-like protein 1 SKP1-like protein 20 SKP1-like protein 1B uncharacterized LOC100280388 uncharacterized LOC100193107 SKP1-like protein 1A SKP1-like protein 1A SKP1-like protein 1A SKP1-like protein 1A SKP1-like protein uncharacterized LOC100306458 SKP1-like protein 1A SKP1-like protein 1B SKP1-like protein 1A SKP1-like protein 1A SKP1-like protein 4 SKP1-like protein 1A SKP1-like protein 1B SKP1-like protein 1B SKP1-like protein 1A SKP1-like protein 1B SKP1-like protein 1B SKP1-like protein 1B SKP1-like protein 13 SKP1-like protein 3 SKP1-like protein 1B SKP1-like protein 1B SKP1-like protein 1B SKP1-like protein 1B SKP1-like protein 1A SKP1-like protein 1A SKP1-like protein 1A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 3
bdi04120 Ubiquitin mediated proteolysis 3
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 3
bdi04120 Ubiquitin mediated proteolysis 3
bdi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 5
tae04120 Ubiquitin mediated proteolysis 5
tae04141 Protein processing in endoplasmic reticulum 5
tae00020 Citrate cycle (TCA cycle) 3
tae00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 6
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 9
zma03083 Polycomb repressive complex 4
zma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 5
zma04016 MAPK signaling pathway - plant 4
zma04070 Phosphatidylinositol signaling system 4
zma04075 Plant hormone signal transduction 4
zma03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 3
zma04120 Ubiquitin mediated proteolysis 3
zma04141 Protein processing in endoplasmic reticulum 3
zma03020 RNA polymerase 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 6
sbi03050 Proteasome 5
sbi03083 Polycomb repressive complex 5
sbi04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 7
sbi04120 Ubiquitin mediated proteolysis 5
sbi03050 Proteasome 4
sbi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 4
sbi04120 Ubiquitin mediated proteolysis 4
sbi04141 Protein processing in endoplasmic reticulum 4
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma03083 Polycomb repressive complex 3
gma04130 SNARE interactions in vesicular transport 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 4
gma04141 Protein processing in endoplasmic reticulum 3
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 5
sly03060 Protein export 2
sly04145 Phagosome 2
sly03083 Polycomb repressive complex 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra04144 Endocytosis 2
bra03083 Polycomb repressive complex 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra03083 Polycomb repressive complex 3
bra04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 7
ppo04141 Protein processing in endoplasmic reticulum 4
ppo03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo03083 Polycomb repressive complex 3
ppo04141 Protein processing in endoplasmic reticulum 3
ppo03272 Virion - Hepatitis viruses 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 3
ghi04141 Protein processing in endoplasmic reticulum 3
ghi03040 Spliceosome 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 3
ghi04141 Protein processing in endoplasmic reticulum 3
ghi03040 Spliceosome 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 3
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 4
bna04120 Ubiquitin mediated proteolysis 4
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 8
bna04141 Protein processing in endoplasmic reticulum 8
bna03083 Polycomb repressive complex 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 6
sot03083 Polycomb repressive complex 5
sot04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 7
sot04120 Ubiquitin mediated proteolysis 6
sot03083 Polycomb repressive complex 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 6
cit04141 Protein processing in endoplasmic reticulum 4
cit03083 Polycomb repressive complex 3
cit00230 Purine metabolism 2
cit04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 9
cit04141 Protein processing in endoplasmic reticulum 7
cit03083 Polycomb repressive complex 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 7
nta03083 Polycomb repressive complex 5
nta04141 Protein processing in endoplasmic reticulum 5
nta03013 Nucleocytoplasmic transport 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 7
nta03083 Polycomb repressive complex 5
nta04141 Protein processing in endoplasmic reticulum 5
nta04144 Endocytosis 3
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 2
nta01200 Carbon metabolism 2
nta00071 Fatty acid degradation 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04120 Ubiquitin mediated proteolysis 4
cre04141 Protein processing in endoplasmic reticulum 4
cre03420 Nucleotide excision repair 3
cre03020 RNA polymerase 2
cre03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100826905 100835363 100845615 123149828 9270098 4347721 100282249 100280388 100193107 8064413 8063324 8075674 100809769 100527683 100306458 101243954 101246287 101268040 103830630 103872814 103852996 100252349 7485611 7470408 107943505 107909473 107938152 106379807 106347076 102592290 102601988 102615892 102625199 107812884 107786549 107761682 5716391
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