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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110433716   SKP1-like protein 1A 
 zma-u.5   100283299   uncharacteriized LOC100283299 
 zma-u.5   100282249   SKP1-like protein 1B 
 zma-u.5   100280388   uncharacterized LOC100280388 
 osa-u.5   9270098   SKP1-like protein 1 
 osa-u.5   4347721   SKP1-like protein 20 
 ath-u.5   SK4   SKP1-like 4 
 ath-u.5   SKP1   S phase kinase-associated protein 1 
 ath-u.5   SK18   E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein 
 gma-u.5   100809769   SKP1-like protein 1A 
 gma-u.5   100527683   SKP1-like protein 
 gma-u.5   100306458   uncharacterized LOC100306458 
 sly-u.5   101243954   SKP1-like protein 1A 
 ppo-u.5   7485611   SKP1-like protein 1B 
 ppo-u.5   7470408   SKP1-like protein 1A 
 ppo-u.5   18099152   SKP1-like protein 1B 
 mtr-u.5   11418787   SKP1-like protein 1 

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Top 50 coexpressed genes to 110433716 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 110433716 (sbi-r.1 coexpression data)

CoexMap"110433716"


sbiLOC110433716 | Entrez gene ID : 110433716    
Species sbi zma osa ath gma sly ppo mtr bra nta cre vvi cit hvu bdi sot tae bna ghi
Paralog 1 3 2 3 3 1 3 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03083 [list] [network] Polycomb repressive complex (59 genes)
sbi04120 [list] [network] Ubiquitin mediated proteolysis (153 genes)
sbi04141 [list] [network] Protein processing in endoplasmic reticulum (204 genes)
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (59 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0097602 [list] [network] cullin family protein binding  (18 genes)  IEA  
Protein XP_021311907.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 8,  chlo_mito 5,  chlo 1  (predict for XP_021311907.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_021311907.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110433716

.
zma-u.5
for
100283299

.
zma-u.5
for
100282249

.
zma-u.5
for
100280388

.
osa-u.5
for
9270098

.
osa-u.5
for
4347721

.
ath-u.5
for
SK4

.
ath-u.5
for
SKP1

.
ath-u.5
for
SK18

.
gma-u.5
for
100809769

.
gma-u.5
for
100527683

.
gma-u.5
for
100306458

.
sly-u.5
for
101243954

.
ppo-u.5
for
7485611

.
ppo-u.5
for
7470408

.
ppo-u.5
for
18099152

.
mtr-u.5
for
11418787

.


Ortholog ID: 252
Species gma gma sly sly osa osa zma zma bra bra ppo tae ghi ghi bna cre sbi sbi sot cit bdi bdi nta nta
Symbol LOC100306458 LOC100809769 LOC101243954 LOC101268040 LOC4347721 LOC9270098 LOC100280388 LOC100193107 LOC103872814 LOC103830630 LOC7470408 LOC123149828 LOC107943505 LOC107909473 LOC106379807 CHLRE_12g501200v5 LOC8063324 LOC8075674 LOC102601988 LOC102615892 LOC100826905 LOC100835363 LOC107761682 LOC107812884
Function* uncharacterized LOC100306458 SKP1-like protein 1A SKP1-like protein 1A SKP1-like protein 1A SKP1-like protein 20 SKP1-like protein 1 uncharacterized LOC100280388 uncharacterized LOC100193107 SKP1-like protein 4 SKP1-like protein 1A SKP1-like protein 1A SKP1-like protein 1 SKP1-like protein 1B SKP1-like protein 1B SKP1-like protein 13 uncharacterized protein SKP1-like protein 1A SKP1-like protein 1A SKP1-like protein 1B SKP1-like protein 1B SKP1-like protein 1 SKP1-like protein 1 SKP1-like protein 1A SKP1-like protein 1A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 4
gma04141 Protein processing in endoplasmic reticulum 3
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma03083 Polycomb repressive complex 3
gma04130 SNARE interactions in vesicular transport 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 5
sly03060 Protein export 2
sly04145 Phagosome 2
sly03083 Polycomb repressive complex 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 6
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 5
zma04016 MAPK signaling pathway - plant 4
zma04070 Phosphatidylinositol signaling system 4
zma04075 Plant hormone signal transduction 4
zma03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 3
zma04120 Ubiquitin mediated proteolysis 3
zma04141 Protein processing in endoplasmic reticulum 3
zma03020 RNA polymerase 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra04144 Endocytosis 2
bra03083 Polycomb repressive complex 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo03083 Polycomb repressive complex 3
ppo04141 Protein processing in endoplasmic reticulum 3
ppo03272 Virion - Hepatitis viruses 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 5
tae04120 Ubiquitin mediated proteolysis 5
tae04141 Protein processing in endoplasmic reticulum 5
tae00020 Citrate cycle (TCA cycle) 3
tae00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 3
ghi04141 Protein processing in endoplasmic reticulum 3
ghi03040 Spliceosome 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 3
ghi04141 Protein processing in endoplasmic reticulum 3
ghi03040 Spliceosome 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 4
bna04120 Ubiquitin mediated proteolysis 4
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04120 Ubiquitin mediated proteolysis 4
cre04141 Protein processing in endoplasmic reticulum 4
cre03420 Nucleotide excision repair 3
cre03020 RNA polymerase 2
cre03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 7
sbi04120 Ubiquitin mediated proteolysis 5
sbi03050 Proteasome 4
sbi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 4
sbi04120 Ubiquitin mediated proteolysis 4
sbi04141 Protein processing in endoplasmic reticulum 4
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 7
sot04120 Ubiquitin mediated proteolysis 6
sot03083 Polycomb repressive complex 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 6
cit04141 Protein processing in endoplasmic reticulum 4
cit03083 Polycomb repressive complex 3
cit00230 Purine metabolism 2
cit04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 3
bdi04120 Ubiquitin mediated proteolysis 3
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 2
nta01200 Carbon metabolism 2
nta00071 Fatty acid degradation 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 7
nta03083 Polycomb repressive complex 5
nta04141 Protein processing in endoplasmic reticulum 5
nta03013 Nucleocytoplasmic transport 2
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100306458 100809769 101243954 101268040 4347721 9270098 100280388 100193107 103872814 103830630 7470408 123149828 107943505 107909473 106379807 5716391 8063324 8075674 102601988 102615892 100826905 100835363 107761682 107812884
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