ATTED-II : GeneCoexpression result

Species	Gene	Description
bdi-r.1	100827359	TBC1 domain family member 13
osa-u.5	4324984	uncharacterized LOC4324984
osa-u.5	4335615	uncharacterized LOC4335615
zma-u.5	100272273	uncharacterized LOC100272273
zma-u.5	100217192	uncharacterized LOC100217192
ath-u.5	AT4G13730	Ypt/Rab-GAP domain of gyp1p superfamily protein
ath-u.5	AT1G04830	Ypt/Rab-GAP domain of gyp1p superfamily protein
gma-u.5	100778830	TBC domain-containing protein C1952.17c
gma-u.5	100780720	TBC1 domain family member 13
gma-u.5	100784538	TBC domain-containing protein C1952.17c
sly-u.5	101267352	uncharacterized LOC101267352
sly-u.5	101258656	uncharacterized LOC101258656
vvi-u.5	100241872	uncharacterized LOC100241872
vvi-u.5	100264542	uncharacterized LOC100264542
ppo-u.5	7485477	uncharacterized LOC7485477
ppo-u.5	18107075	uncharacterized LOC18107075
mtr-u.5	11436303	TBC1 domain family member 13
mtr-u.5	11415850	TBC1 domain family member 13

Annotation

functional annotation

KEGG

GO BP

GO:0090630 [list] [network] activation of GTPase activity	(14 genes)	IEA
GO:0006886 [list] [network] intracellular protein transport	(251 genes)	IEA

GO CC

GO MF

GO:0005096 [list] [network] GTPase activator activity

(52 genes)

IEA

Protein

XP_003564876.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, nucl 4, vacu 1, cysk 1

(predict for XP_003564876.1)

Subcellular
localization
TargetP

chlo 6, other 4

(predict for XP_003564876.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100827359	osa-u.5 for 4324984	osa-u.5 for 4335615	zma-u.5 for 100272273	zma-u.5 for 100217192	ath-u.5 for AT4G13730	ath-u.5 for AT1G04830	gma-u.5 for 100778830	gma-u.5 for 100780720	gma-u.5 for 100784538	sly-u.5 for 101267352	sly-u.5 for 101258656	vvi-u.5 for 100241872	vvi-u.5 for 100264542	ppo-u.5 for 7485477	ppo-u.5 for 18107075	mtr-u.5 for 11436303	mtr-u.5 for 11415850

Ortholog

Ortholog ID: 2830

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

TBC1 domain family member 13

TBC domain-containing protein C1952.17c

TBC1 domain family member 13-like

TBC domain-containing protein C1952.17c-like

uncharacterized LOC4324984

uncharacterized LOC4335615

uncharacterized LOC100217192

uncharacterized LOC100272273

TBC1 domain family member 13

Ypt/Rab-GAP domain of gyp1p superfamily protein

TBC1 domain family member 13

uncharacterized LOC101267352

TBC domain-containing protein C1952.17c

uncharacterized LOC100264542

uncharacterized LOC100241872

TBC domain-containing protein C1952.17c

uncharacterized LOC7485477

TBC1 domain family member 13

TBC1 domain family member 13-like

TBC domain-containing protein C1952.17c-like

TBC1 domain family member 13-like

uncharacterized LOC102618010

uncharacterized LOC102629850

uncharacterized LOC107786337

uncharacterized LOC107801189

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	6
tae04144	Endocytosis	3
tae04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3
zma03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	3
sbi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	9
ath00510	N-Glycan biosynthesis	5
ath00513	Various types of N-glycan biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00562	Inositol phosphate metabolism	2
ath04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00941	Flavonoid biosynthesis	5
gma04144	Endocytosis	2
gma04145	Phagosome	2
gma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00240	Pyrimidine metabolism	2
gma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03250	Viral life cycle - HIV-1	2
bra04120	Ubiquitin mediated proteolysis	2
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	7
vvi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	2
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	7
ghi04145	Phagosome	7
ghi04148	Efferocytosis	7
ghi04142	Lysosome	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	5
ghi00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00620	Pyruvate metabolism	6
bna00900	Terpenoid backbone biosynthesis	4
bna04120	Ubiquitin mediated proteolysis	2
bna03020	RNA polymerase	2
bna03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00941	Flavonoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	5
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	5
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	3

Expression

Expression pattern

Entrez Gene ID^*

100827535

100827359

123066135

123189021

123445145

123426499

4324984

4335615

100217192

100272273

8070950

8078703

827007

839404

100814360

100777799

101267352

103836552

100264542

100241872

7470101

7485477

11436303

11415850

107907335

107934488

106426937

111199884

102583943

102618010

102629850

107786337

107801189

5718748

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100827359 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100827359 (bdi-r.1 coexpression data)


Species	bdi	osa	zma	ath	gma	sly	vvi	ppo	mtr	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	2	2	2	3	2	2	2	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100827359 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100827359 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**