ATTED-II : GeneCoexpression result

Species	Gene	Description
bdi-r.1	100827800	protein RER1A
osa-u.5	107275316	protein RER1A
osa-u.5	4345237	protein RER1A
osa-u.5	4326147	protein RER1A
zma-u.5	100283798	uncharacterized LOC100283798
zma-u.5	100194351	uncharacterized LOC100194351
zma-u.5	100285132	RER1A protein
ath-u.5	AT2G18240	Rer1 family protein
ath-u.5	RER1B	endoplasmatic reticulum retrieval protein 1B
ath-u.5	ATRER1A	Rer1 family protein
gma-u.5	100305541	uncharacterized LOC100305541
gma-u.5	100817031	protein RER1B
gma-u.5	100804538	protein RER1A
sly-u.5	101246980	protein RER1A-like
sly-u.5	104647186	protein RER1A
sly-u.5	101268521	RER1 family protein
vvi-u.5	100241970	protein RER1B
vvi-u.5	100255884	protein RER1A
vvi-u.5	100249677	protein RER1B
ppo-u.5	7462592	protein RER1A
ppo-u.5	7461228	protein RER1A
mtr-u.5	11405778	protein RER1A
mtr-u.5	25493491	protein RER1A
mtr-u.5	11417142	protein RER1A

Annotation

functional annotation

KEGG

GO BP

GO:0006621 [list] [network] protein retention in ER lumen	(8 genes)	IEA
GO:0006890 [list] [network] retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	(32 genes)	IEA

GO CC

GO:0000139 [list] [network] Golgi membrane

(98 genes)

IEA

GO MF

Protein

XP_003573688.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 3, cyto_plas 3, extr 2, cyto 1, chlo 1, vacu 1

(predict for XP_003573688.1)

Subcellular
localization
TargetP

other 5, chlo 3

(predict for XP_003573688.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100827800	osa-u.5 for 107275316	osa-u.5 for 4345237	osa-u.5 for 4326147	zma-u.5 for 100283798	zma-u.5 for 100194351	zma-u.5 for 100285132	ath-u.5 for AT2G18240	ath-u.5 for RER1B	ath-u.5 for ATRER1A	gma-u.5 for 100305541	gma-u.5 for 100817031	gma-u.5 for 100804538	sly-u.5 for 101246980	sly-u.5 for 104647186	sly-u.5 for 101268521	vvi-u.5 for 100241970	vvi-u.5 for 100255884	vvi-u.5 for 100249677	ppo-u.5 for 7462592	ppo-u.5 for 7461228	mtr-u.5 for 11405778	mtr-u.5 for 25493491	mtr-u.5 for 11417142

Ortholog

Ortholog ID: 862

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

RER1B

ATRER1A

Function^*

protein RER1A

protein RER1B-like

protein RER1A-like

protein RER1A

uncharacterized LOC100194351

uncharacterized LOC100284264

protein RER1A

protein RER1A-like

endoplasmatic reticulum retrieval protein 1B

Rer1 family protein

protein RER1A

Rer1 family protein

protein RER1A-like

protein RER1A

protein RER1D

protein RER1B

protein RER1A

protein RER1B

protein RER1D

protein RER1B-like

protein RER1A-like

protein RER1B-like

protein RER1A-like

protein RER1A

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00510	N-Glycan biosynthesis	2
osa00513	Various types of N-glycan biosynthesis	2
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04626	Plant-pathogen interaction	5
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03050	Proteasome	3
zma03420	Nucleotide excision repair	2
zma04120	Ubiquitin mediated proteolysis	2
zma04141	Protein processing in endoplasmic reticulum	2
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	6
zma03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00510	N-Glycan biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00520	Amino sugar and nucleotide sugar metabolism	3
gma01250	Biosynthesis of nucleotide sugars	3
gma00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	2
gma03015	mRNA surveillance pathway	2
gma04136	Autophagy - other	2
gma04382	Cornified envelope formation	2
gma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04142	Lysosome	6
bra04144	Endocytosis	2
bra05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3
ppo04141	Protein processing in endoplasmic reticulum	2
ppo04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	7
ppo04145	Phagosome	4
ppo04142	Lysosome	3
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	7
mtr00020	Citrate cycle (TCA cycle)	4
mtr01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04148	Efferocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	6
cit04145	Phagosome	6
cit04142	Lysosome	4
cit03050	Proteasome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	7
cre03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

100827800

100827863

123148544

123164452

123442350

123413173

4326147

107275316

100194351

100284264

8064961

110433995

816698

830077

100805147

100499996

101246980

104647186

103828409

103842510

100248585

100241970

7471945

7464020

11417142

11405778

107936518

107942423

111213828

106446374

102601257

102605906

102627590

102627924

107762692

107768586

5719734

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100827800 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100827800 (bdi-r.1 coexpression data)


Species	bdi	osa	zma	ath	gma	sly	vvi	ppo	mtr	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	3	3	3	3	3	3	2	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100827800 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100827800 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**