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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100827902   protein TRI1 
 tae-r.2   123143508   upstream activation factor subunit spp27 
 tae-r.2   123136051   protein TRI1 
 tae-r.2   123131983   upstream activation factor subunit spp27 
 hvu-r.1   123401563   upstream activation factor subunit spp27-like 
 osa-u.5   4328187   upstream activation factor subunit spp27 
 zma-u.5   100193662   uncharacterized LOC100193662 
 zma-u.5   100283921   uncharacterized LOC100283921 
 sbi-r.1   8057506   protein TRI1 
 ath-u.5   AT2G35605   SWIB/MDM2 domain superfamily protein 
 ath-u.5   AT3G03590   SWIB/MDM2 domain superfamily protein 
 ath-u.5   AT1G31760   SWIB/MDM2 domain superfamily protein 
 gma-u.5   100779127   protein TRI1 
 gma-u.5   100795307   upstream activation factor subunit UAF30 
 sly-u.5   101253218   upstream activation factor subunit UAF30 
 sly-u.5   101249284   upstream activation factor subunit UAF30 
 bra-r.6   103855169   protein TRI1 
 bra-r.6   103868936   upstream activation factor subunit UAF30 
 vvi-u.5   100252274   upstream activation factor subunit spp27 
 vvi-u.5   100249480   upstream activation factor subunit spp27 
 ppo-u.5   7482403   upstream activation factor subunit spp27 
 mtr-u.5   11407385   upstream activation factor subunit UAF30 
 ghi-r.1   107900687   upstream activation factor subunit UAF30 
 ghi-r.1   107936316   upstream activation factor subunit UAF30 
 ghi-r.1   107929407   upstream activation factor subunit UAF30 
 bna-r.1   106381829   upstream activation factor subunit UAF30 
 bna-r.1   106345163   upstream activation factor subunit UAF30 
 sot-r.1   102600426   upstream activation factor subunit UAF30-like 
 sot-r.1   107063144   protein TRI1-like 
 cit-r.1   112495463   protein TRI1-like 
 cit-r.1   102623572   upstream activation factor subunit UAF30 
 nta-r.1   107804922   upstream activation factor subunit UAF30 
 nta-r.1   107793636   upstream activation factor subunit UAF30-like 
 nta-r.1   107770935   protein TRI1 

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Top 50 coexpressed genes to 100827902 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100827902 (bdi-r.1 coexpression data)

CoexMap"100827902"


bdiLOC100827902 | Entrez gene ID : 100827902      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 2 1 3 2 2 2 2 1 1 3 2 2 2 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
Protein XP_003574019.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 1,  cyto 1  (predict for XP_003574019.1)
Subcellular
localization
TargetP
mito 6,  chlo 4  (predict for XP_003574019.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100827902
tae-r.2
for
123143508
tae-r.2
for
123136051
tae-r.2
for
123131983
hvu-r.1
for
123401563
osa-u.5
for
4328187
zma-u.5
for
100193662
zma-u.5
for
100283921
sbi-r.1
for
8057506
ath-u.5
for
AT2G35605
ath-u.5
for
AT3G03590
ath-u.5
for
AT1G31760
gma-u.5
for
100779127
gma-u.5
for
100795307
sly-u.5
for
101253218
sly-u.5
for
101249284
bra-r.6
for
103855169
bra-r.6
for
103868936
vvi-u.5
for
100252274
vvi-u.5
for
100249480
ppo-u.5
for
7482403
mtr-u.5
for
11407385
ghi-r.1
for
107900687
ghi-r.1
for
107936316
ghi-r.1
for
107929407
bna-r.1
for
106381829
bna-r.1
for
106345163
sot-r.1
for
102600426
sot-r.1
for
107063144
cit-r.1
for
112495463
cit-r.1
for
102623572
nta-r.1
for
107804922
nta-r.1
for
107793636
nta-r.1
for
107770935


Ortholog ID: 5083
Species bdi tae tae tae hvu osa zma zma sbi ath ath ath gma gma sly sly bra bra vvi vvi ppo mtr ghi ghi ghi bna bna sot sot cit cit nta nta nta
Symbol LOC100827902 LOC123143508 LOC123136051 LOC123131983 LOC123401563 LOC4328187 LOC100193662 LOC100283921 LOC8057506 AT2G35605 AT3G03590 AT1G31760 LOC100779127 LOC100795307 LOC101253218 LOC101249284 LOC103855169 LOC103868936 LOC100252274 LOC100249480 LOC7482403 LOC11407385 LOC107900687 LOC107936316 LOC107929407 LOC106381829 LOC106418692 LOC102600426 LOC107063144 LOC112495463 LOC102623572 LOC107804922 LOC107793636 LOC107770935
Function* protein TRI1 upstream activation factor subunit spp27 protein TRI1 upstream activation factor subunit spp27 upstream activation factor subunit spp27-like upstream activation factor subunit spp27 uncharacterized LOC100193662 uncharacterized LOC100283921 protein TRI1 SWIB/MDM2 domain superfamily protein SWIB/MDM2 domain superfamily protein SWIB/MDM2 domain superfamily protein protein TRI1 upstream activation factor subunit UAF30 upstream activation factor subunit UAF30 upstream activation factor subunit UAF30 protein TRI1 upstream activation factor subunit UAF30 upstream activation factor subunit spp27 upstream activation factor subunit spp27 upstream activation factor subunit spp27 upstream activation factor subunit UAF30 upstream activation factor subunit UAF30 upstream activation factor subunit UAF30 upstream activation factor subunit UAF30 upstream activation factor subunit UAF30 protein TRI1-like upstream activation factor subunit UAF30-like protein TRI1-like protein TRI1-like upstream activation factor subunit UAF30 upstream activation factor subunit UAF30 upstream activation factor subunit UAF30-like protein TRI1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
zma03040 Spliceosome 3
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03040 Spliceosome 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 7
ath03030 DNA replication 4
ath03410 Base excision repair 4
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma03040 Spliceosome 3
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03010 Ribosome 3
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 8
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 5
cit04141 Protein processing in endoplasmic reticulum 4
cit03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100827902 123143508 123136051 123131983 123401563 4328187 100193662 100283921 8057506 818127 821215 840063 100779127 100795307 101253218 101249284 103855169 103868936 100252274 100249480 7482403 11407385 107900687 107936316 107929407 106381829 106418692 102600426 107063144 112495463 102623572 107804922 107793636 107770935
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