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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100827903   CDT1-like protein a, chloroplastic 
 osa-u.5   4348970   CDT1-like protein b 
 zma-u.5   100274350   CDT1a protein 
 zma-u.5   100280492   CDT1a protein 
 zma-u.5   100383008   CDT1-like protein a chloroplastic 
 gma-u.5   102670055   CDT1-like protein b 
 gma-u.5   100794715   CDT1-like protein a, chloroplastic 
 sly-u.5   101254874   CDT1-like protein a, chloroplastic 
 vvi-u.5   100244348   CDT1-like protein a, chloroplastic 
 ppo-u.5   7494374   CDT1-like protein a, chloroplastic 
 mtr-u.5   11422247   CDT1-like protein a, chloroplastic 

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Top 50 coexpressed genes to 100827903 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100827903 (bdi-r.1 coexpression data)

CoexMap"100827903"


bdiLOC100827903 | Entrez gene ID : 100827903      
Species bdi osa zma gma sly vvi ppo mtr hvu bna cit bra ghi sbi nta ath tae cre sot
Paralog 1 1 3 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030174 [list] [network] regulation of DNA-templated DNA replication initiation  (3 genes)  IEA  
GO:0071163 [list] [network] DNA replication preinitiation complex assembly  (3 genes)  IEA  
GO:0000076 [list] [network] DNA replication checkpoint signaling  (15 genes)  IEA  
GO:0000278 [list] [network] mitotic cell cycle  (173 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
GO:0070182 [list] [network] DNA polymerase binding  (5 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1744 genes)  IEA  
Protein XP_003574103.1 [sequence] [blastp]
XP_010234853.1 [sequence] [blastp]
XP_024318145.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 1,  vacu 1,  pero 1,  cysk 1  (predict for XP_003574103.1)
cyto 4,  nucl 3,  chlo 1,  vacu 1,  pero 1,  cysk 1  (predict for XP_010234853.1)
cyto 4,  nucl 3,  chlo 1,  vacu 1,  pero 1,  cysk 1  (predict for XP_024318145.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003574103.1)
other 8  (predict for XP_010234853.1)
other 8  (predict for XP_024318145.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100827903
osa-u.5
for
4348970
zma-u.5
for
100274350
zma-u.5
for
100280492
zma-u.5
for
100383008
gma-u.5
for
102670055
gma-u.5
for
100794715
sly-u.5
for
101254874
vvi-u.5
for
100244348
ppo-u.5
for
7494374
mtr-u.5
for
11422247


Ortholog ID: 11843
Species bdi tae tae hvu osa zma sbi sbi gma gma sly vvi ppo mtr sot nta nta
Symbol LOC100827903 LOC123122575 LOC123047077 LOC123432511 LOC4348970 LOC100383008 LOC8067113 LOC8079590 LOC100794715 LOC102670055 LOC101254874 LOC100244348 LOC7494374 LOC11422247 LOC102579973 LOC107776001 LOC107829689
Function* CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic CDT1-like protein b CDT1-like protein a chloroplastic CDT1-like protein b CDT1-like protein b CDT1-like protein a, chloroplastic CDT1-like protein b CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma00240 Pyrimidine metabolism 3
gma01232 Nucleotide metabolism 3
gma03030 DNA replication 3
gma03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 7
gma03430 Mismatch repair 5
gma03410 Base excision repair 4
gma03420 Nucleotide excision repair 4
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 3
vvi03440 Homologous recombination 3
vvi03420 Nucleotide excision repair 2
vvi03430 Mismatch repair 2
vvi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta00480 Glutathione metabolism 2
nta01232 Nucleotide metabolism 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta00480 Glutathione metabolism 2
nta01232 Nucleotide metabolism 2
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100827903 123122575 123047077 123432511 4348970 100383008 8067113 8079590 100794715 102670055 101254874 100244348 7494374 11422247 102579973 107776001 107829689
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