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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100827990   pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic 
 tae-r.2   123145463   pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic 
 tae-r.2   123138207   pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic 
 tae-r.2   123128355   pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic 
 hvu-r.1   123403739   pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic 
 osa-u.5   4330740   pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic-like 
 zma-u.5   100126361   pentatricopeptide repeat 5 
 sbi-r.1   8075700   pentatricopeptide repeat-containing protein At4g39620, chloroplastic 
 ath-u.5   EMB2453   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100808981   pentatricopeptide repeat-containing protein At4g39620, chloroplastic 
 gma-u.5   100795589   pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic 
 sly-u.5   101262511   pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic 
 bra-r.6   103850678   pentatricopeptide repeat-containing protein At4g39620, chloroplastic 
 vvi-u.5   100249090   pentatricopeptide repeat-containing protein At4g39620, chloroplastic 
 ppo-u.5   7477117   pentatricopeptide repeat-containing protein At4g39620, chloroplastic 
 mtr-u.5   11427444   pentatricopeptide repeat-containing protein At4g39620, chloroplastic 
 ghi-r.1   121222446   pentatricopeptide repeat-containing protein At4g39620, chloroplastic-like 
 ghi-r.1   107914377   pentatricopeptide repeat-containing protein At4g39620, chloroplastic 
 bna-r.1   106358406   pentatricopeptide repeat-containing protein At4g39620, chloroplastic 
 bna-r.1   106439122   pentatricopeptide repeat-containing protein At4g39620, chloroplastic 
 sot-r.1   102582767   pentatricopeptide repeat-containing protein At4g39620, chloroplastic 
 cit-r.1   102621702   pentatricopeptide repeat-containing protein At4g39620, chloroplastic-like 
 nta-r.1   107769356   pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic-like 
 nta-r.1   107767475   pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic 

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Top 50 coexpressed genes to 100827990 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100827990 (bdi-r.1 coexpression data)

CoexMap"100827990"


bdiLOC100827990 | Entrez gene ID : 100827990      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 2 1 1 1 1 1 2 2 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (271 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003570635.1 [sequence] [blastp]
XP_010236111.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  extr 1,  cyto_mito 1  (predict for XP_003570635.1)
chlo 9,  chlo_mito 5  (predict for XP_010236111.1)
Subcellular
localization
TargetP
chlo 5,  mito 4  (predict for XP_003570635.1)
mito 8,  other 4  (predict for XP_010236111.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100827990
tae-r.2
for
123145463
tae-r.2
for
123138207
tae-r.2
for
123128355
hvu-r.1
for
123403739
osa-u.5
for
4330740
zma-u.5
for
100126361
sbi-r.1
for
8075700
ath-u.5
for
EMB2453
gma-u.5
for
100808981
gma-u.5
for
100795589
sly-u.5
for
101262511
bra-r.6
for
103850678
vvi-u.5
for
100249090
ppo-u.5
for
7477117
mtr-u.5
for
11427444
ghi-r.1
for
121222446
ghi-r.1
for
107914377
bna-r.1
for
106358406
bna-r.1
for
106439122
sot-r.1
for
102582767
cit-r.1
for
102621702
nta-r.1
for
107769356
nta-r.1
for
107767475


Ortholog ID: 10913
Species bdi tae tae tae hvu osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC100827990 LOC123145463 LOC123138207 LOC123128355 LOC123403739 LOC4330740 LOC100126361 LOC8075700 EMB2453 LOC100808981 LOC100795589 LOC101262511 LOC103850678 LOC100249090 LOC7477117 LOC11427444 LOC121222446 LOC107914377 LOC106358406 LOC106439122 LOC102582767 LOC102621702 LOC107769356 LOC107767475
Function* pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic-like pentatricopeptide repeat 5 pentatricopeptide repeat-containing protein At4g39620, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g39620, chloroplastic pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic pentatricopeptide repeat-containing protein At4g39620, chloroplastic pentatricopeptide repeat-containing protein At4g39620, chloroplastic pentatricopeptide repeat-containing protein At4g39620, chloroplastic pentatricopeptide repeat-containing protein At4g39620, chloroplastic pentatricopeptide repeat-containing protein At4g39620, chloroplastic-like pentatricopeptide repeat-containing protein At4g39620, chloroplastic pentatricopeptide repeat-containing protein At4g39620, chloroplastic pentatricopeptide repeat-containing protein At4g39620, chloroplastic pentatricopeptide repeat-containing protein At4g39620, chloroplastic pentatricopeptide repeat-containing protein At4g39620, chloroplastic-like pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic-like pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 4
tae01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 4
tae01240 Biosynthesis of cofactors 4
tae00220 Arginine biosynthesis 3
tae00330 Arginine and proline metabolism 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00860 Porphyrin metabolism 4
gma01240 Biosynthesis of cofactors 4
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100827990 123145463 123138207 123128355 123403739 4330740 100126361 8075700 830116 100808981 100795589 101262511 103850678 100249090 7477117 11427444 121222446 107914377 106358406 106439122 102582767 102621702 107769356 107767475
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