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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100828122   intron-binding protein aquarius 
 tae-r.2   123097287   RNA helicase aquarius 
 tae-r.2   123172598   RNA helicase aquarius 
 tae-r.2   123085945   RNA helicase aquarius 
 hvu-r.1   123448474   RNA helicase aquarius 
 osa-u.5   4332999   uncharacterized LOC4332999 
 zma-u.5   103635888   RNA helicase aquarius 
 sbi-r.1   8077122   intron-binding protein aquarius 
 ath-u.5   EMB2765   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100807042   RNA helicase aquarius 
 gma-u.5   100778665   RNA helicase aquarius 
 sly-u.5   101244224   uncharacterized LOC101244224 
 bra-r.6   103867082   RNA helicase aquarius 
 vvi-u.5   100260373   uncharacterized LOC100260373 
 vvi-u.5   100243162   uncharacterized LOC100243162 
 ppo-u.5   7460223   uncharacterized LOC7460223 
 mtr-u.5   25482853   RNA helicase aquarius 
 ghi-r.1   107928342   RNA helicase aquarius 
 ghi-r.1   107909088   RNA helicase aquarius 
 bna-r.1   106453413   RNA helicase aquarius-like 
 bna-r.1   106410365   RNA helicase aquarius-like 
 sot-r.1   102599903   intron-binding protein aquarius 
 cit-r.1   102622876   uncharacterized LOC102622876 
 nta-r.1   107775465   uncharacterized LOC107775465 
 nta-r.1   107815634   uncharacterized LOC107815634 
 cre-r.1   CHLRE_06g300750v5   uncharacterized protein 

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Top 50 coexpressed genes to 100828122 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100828122 (bdi-r.1 coexpression data)

CoexMap"100828122"


bdiLOC100828122 | Entrez gene ID : 100828122      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 2 1 1 2 1 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03040 [list] [network] Spliceosome (282 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (166 genes)  IEA  
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (57 genes)  IEA  
GO MF
GO:0004386 [list] [network] helicase activity  (125 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (271 genes)  IEA  
Protein XP_003557801.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9  (predict for XP_003557801.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_003557801.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100828122
tae-r.2
for
123097287
tae-r.2
for
123172598
tae-r.2
for
123085945
hvu-r.1
for
123448474
osa-u.5
for
4332999
zma-u.5
for
103635888
sbi-r.1
for
8077122
ath-u.5
for
EMB2765
gma-u.5
for
100807042
gma-u.5
for
100778665
sly-u.5
for
101244224
bra-r.6
for
103867082
vvi-u.5
for
100260373
vvi-u.5
for
100243162
ppo-u.5
for
7460223
mtr-u.5
for
25482853
ghi-r.1
for
107928342
ghi-r.1
for
107909088
bna-r.1
for
106453413
bna-r.1
for
106410365
sot-r.1
for
102599903
cit-r.1
for
102622876
nta-r.1
for
107775465
nta-r.1
for
107815634
cre-r.1
for
CHLRE_06g300750v5


Ortholog ID: 8910
Species bdi tae tae tae hvu osa zma sbi ath gma gma sly bra vvi vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100828122 LOC123097287 LOC123172598 LOC123085945 LOC123448474 LOC4332999 LOC103635888 LOC8077122 EMB2765 LOC100807042 LOC100778665 LOC101244224 LOC103867082 LOC100260373 LOC100243162 LOC7460223 LOC25482853 LOC107928342 LOC107909088 LOC106453413 LOC106410365 LOC102599903 LOC102622876 LOC107775465 LOC107815634 CHLRE_06g300750v5
Function* intron-binding protein aquarius RNA helicase aquarius RNA helicase aquarius RNA helicase aquarius RNA helicase aquarius uncharacterized LOC4332999 RNA helicase aquarius intron-binding protein aquarius P-loop containing nucleoside triphosphate hydrolases superfamily protein RNA helicase aquarius RNA helicase aquarius uncharacterized LOC101244224 RNA helicase aquarius uncharacterized LOC100260373 uncharacterized LOC100243162 uncharacterized LOC7460223 RNA helicase aquarius RNA helicase aquarius RNA helicase aquarius RNA helicase aquarius-like RNA helicase aquarius-like intron-binding protein aquarius uncharacterized LOC102622876 uncharacterized LOC107775465 uncharacterized LOC107815634 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03040 Spliceosome 4
tae03020 RNA polymerase 2
tae03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03015 mRNA surveillance pathway 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03040 Spliceosome 4
tae03440 Homologous recombination 2
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu03013 Nucleocytoplasmic transport 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma04120 Ubiquitin mediated proteolysis 3
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi03040 Spliceosome 3
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 7
bra03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03420 Nucleotide excision repair 3
ghi03020 RNA polymerase 2
ghi03040 Spliceosome 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03420 Nucleotide excision repair 3
ghi03020 RNA polymerase 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
bna03013 Nucleocytoplasmic transport 4
bna03018 RNA degradation 2
bna03030 DNA replication 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 10
bna03018 RNA degradation 2
bna03030 DNA replication 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit04120 Ubiquitin mediated proteolysis 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03040 Spliceosome 4
nta03018 RNA degradation 2
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03018 RNA degradation 2
nta04142 Lysosome 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 10
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100828122 123097287 123172598 123085945 123448474 4332999 103635888 8077122 818459 100807042 100778665 101244224 103867082 100260373 100243162 7460223 25482853 107928342 107909088 106453413 106410365 102599903 102622876 107775465 107815634 5716974
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