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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100828214   DNA polymerase epsilon subunit B 
 tae-r.2   123068998   DNA polymerase epsilon subunit B 
 tae-r.2   123077528   DNA polymerase epsilon subunit B 
 tae-r.2   123060456   DNA polymerase epsilon subunit B 
 hvu-r.1   123442976   DNA polymerase epsilon subunit B 
 osa-u.5   4337886   DNA polymerase epsilon subunit B 
 zma-u.5   100280690   DNA polymerase epsilon subunit 2 
 sbi-r.1   8083517   DNA polymerase epsilon subunit B 
 ath-u.5   DPB2   DNA polymerase epsilon subunit B2 
 gma-u.5   100784116   DNA polymerase epsilon subunit B 
 sly-u.5   101254462   DNA polymerase epsilon subunit B 
 bra-r.6   103858328   DNA polymerase epsilon subunit B 
 vvi-u.5   100257823   DNA polymerase epsilon subunit B 
 ppo-u.5   7454020   DNA polymerase epsilon subunit B 
 mtr-u.5   25496685   DNA polymerase epsilon subunit B 
 ghi-r.1   107907498   DNA polymerase epsilon subunit B 
 ghi-r.1   107907353   DNA polymerase epsilon subunit B 
 bna-r.1   106441955   DNA polymerase epsilon subunit B-like 
 bna-r.1   106397748   DNA polymerase epsilon subunit B-like 
 sot-r.1   102581718   DNA polymerase epsilon subunit 2 
 cit-r.1   102610782   DNA polymerase epsilon subunit B 
 nta-r.1   107771390   DNA polymerase epsilon subunit B-like 
 nta-r.1   107789473   DNA polymerase epsilon subunit B 
 cre-r.1   CHLRE_10g424200v5   uncharacterized protein 

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Top 50 coexpressed genes to 100828214 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100828214 (bdi-r.1 coexpression data)

CoexMap"100828214"


bdiLOC100828214 | Entrez gene ID : 100828214      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 1 1 1 1 1 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03030 [list] [network] DNA replication (49 genes)
bdi03410 [list] [network] Base excision repair (50 genes)
bdi03420 [list] [network] Nucleotide excision repair (85 genes)
GO BP
GO:0042276 [list] [network] error-prone translesion synthesis  (6 genes)  IEA  
GO:0006261 [list] [network] DNA-templated DNA replication  (85 genes)  IEA  
GO CC
GO:0008622 [list] [network] epsilon DNA polymerase complex  (3 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (1744 genes)  IEA  
Protein XP_003574603.1 [sequence] [blastp]
XP_014755791.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_003574603.1)
chlo 6,  mito 2,  nucl 1  (predict for XP_014755791.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_003574603.1)
mito 8  (predict for XP_014755791.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100828214
tae-r.2
for
123068998
tae-r.2
for
123077528
tae-r.2
for
123060456
hvu-r.1
for
123442976
osa-u.5
for
4337886
zma-u.5
for
100280690
sbi-r.1
for
8083517
ath-u.5
for
DPB2
gma-u.5
for
100784116
sly-u.5
for
101254462
bra-r.6
for
103858328
vvi-u.5
for
100257823
ppo-u.5
for
7454020
mtr-u.5
for
25496685
ghi-r.1
for
107907498
ghi-r.1
for
107907353
bna-r.1
for
106441955
bna-r.1
for
106397748
sot-r.1
for
102581718
cit-r.1
for
102610782
nta-r.1
for
107771390
nta-r.1
for
107789473
cre-r.1
for
CHLRE_10g424200v5


Ortholog ID: 10954
Species bdi tae tae tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100828214 LOC123068998 LOC123077528 LOC123060456 LOC123442976 LOC4337886 LOC100280690 LOC8083517 DPB2 LOC100784116 LOC101254462 LOC103858328 LOC100257823 LOC7454020 LOC25496685 LOC107907498 LOC107907353 LOC106441955 LOC106397748 LOC102581718 LOC102610782 LOC107771390 LOC107789473 CHLRE_10g424200v5
Function* DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit 2 DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B2 DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B-like DNA polymerase epsilon subunit B-like DNA polymerase epsilon subunit 2 DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B-like DNA polymerase epsilon subunit B uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 8
bdi03440 Homologous recombination 3
bdi03460 Fanconi anemia pathway 3
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 11
tae03420 Nucleotide excision repair 4
tae03410 Base excision repair 3
tae03440 Homologous recombination 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 17
tae03410 Base excision repair 4
tae03420 Nucleotide excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 10
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 12
osa03420 Nucleotide excision repair 3
osa03430 Mismatch repair 2
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 14
zma03420 Nucleotide excision repair 4
zma03430 Mismatch repair 3
zma03440 Homologous recombination 3
zma03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 12
sbi03420 Nucleotide excision repair 3
sbi03430 Mismatch repair 2
sbi03440 Homologous recombination 2
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 4
ath03030 DNA replication 4
ath03460 Fanconi anemia pathway 3
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 15
gma03420 Nucleotide excision repair 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 11
sly03420 Nucleotide excision repair 3
sly03430 Mismatch repair 2
sly03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 4
bra03440 Homologous recombination 4
bra03420 Nucleotide excision repair 3
bra03460 Fanconi anemia pathway 3
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 10
vvi03420 Nucleotide excision repair 4
vvi03410 Base excision repair 3
vvi03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 9
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 7
ghi00270 Cysteine and methionine metabolism 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 9
ghi00270 Cysteine and methionine metabolism 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 11
bna03410 Base excision repair 6
bna03420 Nucleotide excision repair 6
bna03430 Mismatch repair 6
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 11
bna03410 Base excision repair 6
bna03420 Nucleotide excision repair 6
bna03430 Mismatch repair 6
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 9
sot03430 Mismatch repair 2
sot03410 Base excision repair 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 13
nta03420 Nucleotide excision repair 3
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 15
nta03420 Nucleotide excision repair 3
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03410 Base excision repair 3
cre03030 DNA replication 2
cre03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100828214 123068998 123077528 123060456 123442976 4337886 100280690 8083517 832272 100784116 101254462 103858328 100257823 7454020 25496685 107907498 107907353 106441955 106397748 102581718 102610782 107771390 107789473 5728215
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