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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106441955   DNA polymerase epsilon subunit B-like 
 ath-u.5   DPB2   DNA polymerase epsilon subunit B2 
 gma-u.5   100784116   DNA polymerase epsilon subunit B 
 vvi-u.5   100257823   DNA polymerase epsilon subunit B 
 ppo-u.5   7454020   DNA polymerase epsilon subunit B 
 mtr-u.5   25496685   DNA polymerase epsilon subunit B 
 sly-u.5   101254462   DNA polymerase epsilon subunit B 
 osa-u.5   4337886   DNA polymerase epsilon subunit B 
 zma-u.5   100280690   DNA polymerase epsilon subunit 2 

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Top 50 coexpressed genes to 106441955 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106441955 (bna-r.1 coexpression data)

CoexMap"106441955"


bnaLOC106441955 | Entrez gene ID : 106441955    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03030 [list] [network] DNA replication (118 genes)
bna03410 [list] [network] Base excision repair (126 genes)
bna03420 [list] [network] Nucleotide excision repair (233 genes)
GO BP
GO:0042276 [list] [network] error-prone translesion synthesis  (13 genes)  IEA  
GO:0006261 [list] [network] DNA-templated DNA replication  (215 genes)  IEA  
GO CC
GO:0008622 [list] [network] epsilon DNA polymerase complex  (7 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_048631865.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  mito 2,  chlo 2,  cyto_nucl 2,  cyto_mito 1  (predict for XP_048631865.1)
Subcellular
localization
TargetP
scret 3  (predict for XP_048631865.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106441955

.
ath-u.5
for
DPB2

.
gma-u.5
for
100784116

.
vvi-u.5
for
100257823

.
ppo-u.5
for
7454020

.
mtr-u.5
for
25496685

.
sly-u.5
for
101254462

.
osa-u.5
for
4337886

.
zma-u.5
for
100280690

.


Ortholog ID: 10954
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol DPB2 LOC100784116 LOC101254462 LOC4337886 LOC100280690 LOC103858328 LOC100257823 LOC7454020 LOC25496685 LOC123068998 LOC123077528 LOC123442976 LOC107907353 LOC107907498 LOC106397748 LOC106441955 CHLRE_10g424200v5 LOC8083517 LOC102581718 LOC102610782 LOC100828214 LOC107789473 LOC107771390
Function* DNA polymerase epsilon subunit B2 DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit 2 DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B-like DNA polymerase epsilon subunit B-like uncharacterized protein DNA polymerase epsilon subunit B DNA polymerase epsilon subunit 2 DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B DNA polymerase epsilon subunit B-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 4
ath03030 DNA replication 4
ath03460 Fanconi anemia pathway 3
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 15
gma03420 Nucleotide excision repair 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 11
sly03420 Nucleotide excision repair 3
sly03430 Mismatch repair 2
sly03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 12
osa03420 Nucleotide excision repair 3
osa03430 Mismatch repair 2
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 14
zma03420 Nucleotide excision repair 4
zma03430 Mismatch repair 3
zma03440 Homologous recombination 3
zma03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 4
bra03440 Homologous recombination 4
bra03420 Nucleotide excision repair 3
bra03460 Fanconi anemia pathway 3
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 10
vvi03420 Nucleotide excision repair 4
vvi03410 Base excision repair 3
vvi03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 9
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 11
tae03420 Nucleotide excision repair 4
tae03410 Base excision repair 3
tae03440 Homologous recombination 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 17
tae03410 Base excision repair 4
tae03420 Nucleotide excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 9
ghi00270 Cysteine and methionine metabolism 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 7
ghi00270 Cysteine and methionine metabolism 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 11
bna03410 Base excision repair 6
bna03420 Nucleotide excision repair 6
bna03430 Mismatch repair 6
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 11
bna03410 Base excision repair 6
bna03420 Nucleotide excision repair 6
bna03430 Mismatch repair 6
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03410 Base excision repair 3
cre03030 DNA replication 2
cre03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 12
sbi03420 Nucleotide excision repair 3
sbi03430 Mismatch repair 2
sbi03440 Homologous recombination 2
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 9
sot03430 Mismatch repair 2
sot03410 Base excision repair 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 8
bdi03440 Homologous recombination 3
bdi03460 Fanconi anemia pathway 3
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 15
nta03420 Nucleotide excision repair 3
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 13
nta03420 Nucleotide excision repair 3
nta03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832272 100784116 101254462 4337886 100280690 103858328 100257823 7454020 25496685 123068998 123077528 123442976 107907353 107907498 106397748 106441955 5728215 8083517 102581718 102610782 100828214 107789473 107771390
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