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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100829326   histone H1 
 bdi-r.1   100833820   histone H1 
 bdi-r.1   100834570   histone H1 
 tae-r.2   123123238   histone H1-like 
 tae-r.2   606310   histone H1-like 
 tae-r.2   606309   histone H1-like 
 hvu-r.1   123452741   histone H1-like 
 hvu-r.1   123452742   histone H1 
 hvu-r.1   123427445   histone H1-like 
 osa-u.5   4342583   histone H1 
 osa-u.5   4335314   histone H1 
 osa-u.5   4334439   histone H1 
 zma-u.5   103625810   histone H1-like 
 zma-u.5   541964   histone H1-like protein 
 zma-u.5   100382582   histone one (H1) 
 sbi-r.1   8057614   histone H1 
 sbi-r.1   8056631   histone H1 
 sbi-r.1   8081244   histone H1 
 ath-u.5   HIS1-3   histone H1-3 
 ath-u.5   AT1G06760   winged-helix DNA-binding transcription factor family protein 
 ath-u.5   AT2G30620   winged-helix DNA-binding transcription factor family protein 
 gma-u.5   100795994   histone H1 
 gma-u.5   100797229   histone H1 
 gma-u.5   100810590   histone H1.2-like 
 sly-u.5   H1   histone H1 
 sly-u.5   544142   H1 histone-like protein 
 sly-u.5   101245495   histone H1-like 
 bra-r.6   103857332   histone H1.2 
 bra-r.6   103837838   histone H1 
 bra-r.6   103865059   histone H1.2 
 vvi-u.5   100259836   histone H1 
 vvi-u.5   100254064   histone H1 
 vvi-u.5   100251147   histone H1 
 ppo-u.5   7460433   histone H1 
 ppo-u.5   7474614   histone H1-like 
 ppo-u.5   7479991   histone H1.2 
 mtr-u.5   25484627   histone H1 
 mtr-u.5   25499208   histone H1 
 mtr-u.5   25501631   histone H1-like 
 ghi-r.1   107893211   histone H1 
 ghi-r.1   107912347   histone H1 
 ghi-r.1   107912798   histone H1 
 bna-r.1   106366424   histone H1 
 bna-r.1   111200897   histone H1 
 bna-r.1   106399610   histone H1.1-like 
 sot-r.1   102583906   histone H1 
 sot-r.1   102586395   histone H1 
 cit-r.1   102612106   histone H1 
 cit-r.1   102618662   histone H1-like 
 cit-r.1   102626409   histone H1 
 nta-r.1   107832044   histone H1-like 
 nta-r.1   107807853   uncharacterized LOC107807853 
 nta-r.1   107784947   histone H1-like 
 cre-r.1   CHLRE_06g275900v5   uncharacterized protein 
 cre-r.1   CHLRE_13g567450v5   uncharacterized protein 

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Top 50 coexpressed genes to 100829326 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100829326 (bdi-r.1 coexpression data)

CoexMap"100829326"


bdiLOC100829326 | Entrez gene ID : 100829326      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2 3 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045910 [list] [network] negative regulation of DNA recombination  (11 genes)  IEA  
GO:0030261 [list] [network] chromosome condensation  (14 genes)  IEA  
GO:0006334 [list] [network] nucleosome assembly  (45 genes)  IEA  
GO CC
GO:0000786 [list] [network] nucleosome  (64 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
GO:0031492 [list] [network] nucleosomal DNA binding  (8 genes)  IEA  
GO:0030527 [list] [network] structural constituent of chromatin  (55 genes)  IEA  
GO:0003690 [list] [network] double-stranded DNA binding  (432 genes)  IEA  
Protein XP_003557467.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_003557467.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003557467.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100829326
bdi-r.1
for
100833820
bdi-r.1
for
100834570
tae-r.2
for
123123238
tae-r.2
for
606310
tae-r.2
for
606309
hvu-r.1
for
123452741
hvu-r.1
for
123452742
hvu-r.1
for
123427445
osa-u.5
for
4342583
osa-u.5
for
4335314
osa-u.5
for
4334439
zma-u.5
for
103625810
zma-u.5
for
541964
zma-u.5
for
100382582
sbi-r.1
for
8057614
sbi-r.1
for
8056631
sbi-r.1
for
8081244
ath-u.5
for
HIS1-3
ath-u.5
for
AT1G06760
ath-u.5
for
AT2G30620
gma-u.5
for
100795994
gma-u.5
for
100797229
gma-u.5
for
100810590
sly-u.5
for
H1
sly-u.5
for
544142
sly-u.5
for
101245495
bra-r.6
for
103857332
bra-r.6
for
103837838
bra-r.6
for
103865059
vvi-u.5
for
100259836
vvi-u.5
for
100254064
vvi-u.5
for
100251147
ppo-u.5
for
7460433
ppo-u.5
for
7474614
ppo-u.5
for
7479991
mtr-u.5
for
25484627
mtr-u.5
for
25499208
mtr-u.5
for
25501631
ghi-r.1
for
107893211
ghi-r.1
for
107912347
ghi-r.1
for
107912798
bna-r.1
for
106366424
bna-r.1
for
111200897
bna-r.1
for
106399610
sot-r.1
for
102583906
sot-r.1
for
102586395
cit-r.1
for
102612106
cit-r.1
for
102618662
cit-r.1
for
102626409
nta-r.1
for
107832044
nta-r.1
for
107807853
nta-r.1
for
107784947
cre-r.1
for
CHLRE_06g275900v5
cre-r.1
for
CHLRE_13g567450v5


Ortholog ID: 718
Species bdi bdi bdi tae tae tae hvu hvu hvu osa osa osa zma zma zma sbi sbi sbi ath ath ath gma gma gma sly sly sly bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit cit nta nta nta cre cre
Symbol LOC100829326 LOC100833820 LOC100834570 LOC123054118 LOC123054116 LOC123123232 LOC123452741 LOC123452742 LOC123452756 LOC4342583 LOC4335314 LOC4334439 LOC103625810 LOC541964 LOC541973 LOC8057614 LOC8056631 LOC8081244 HIS1-3 AT1G06760 AT2G30620 LOC100797229 LOC100775944 LOC100306187 H1 LOC544142 LOC101245495 LOC103857332 LOC103837838 LOC103867940 LOC100254064 LOC100251147 LOC100247613 LOC7460433 LOC18101583 LOC18099218 LOC25484335 LOC25484327 LOC107913009 LOC107924311 LOC107894274 LOC106406187 LOC106426396 LOC106348386 LOC102583906 LOC102586395 LOC102591139 LOC102612106 LOC102618662 LOC102626409 LOC107785532 LOC107766305 LOC107808821 CHLRE_06g275900v5 CHLRE_13g567450v5
Function* histone H1 histone H1 histone H1 histone H1-like histone H1-like histone H1-like histone H1-like histone H1 histone H1-like histone H1 histone H1 histone H1 histone H1-like histone H1-like protein histone one (H1) 101 histone H1 histone H1 histone H1 histone H1-3 winged-helix DNA-binding transcription factor family protein winged-helix DNA-binding transcription factor family protein histone H1 histone H1 H1/H5 domain-containing protein histone H1 H1 histone-like protein histone H1-like histone H1.2 histone H1 histone H1.2 histone H1 histone H1 histone H1 histone H1 histone H1 histone H1 histone H1 histone H1 histone H1 histone H1 histone H1 histone H1.2-like histone H1.2 histone H1.2 histone H1 histone H1 histone H1-like histone H1 histone H1-like histone H1 histone H1.2 uncharacterized LOC107766305 histone H1-like uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 2
zma00670 One carbon pool by folate 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100829326 100833820 100834570 123054118 123054116 123123232 123452741 123452742 123452756 4342583 4335314 4334439 103625810 541964 541973 8057614 8056631 8081244 816317 837187 817612 100797229 100775944 100306187 778281 544142 101245495 103857332 103837838 103867940 100254064 100251147 100247613 7460433 18101583 18099218 25484335 25484327 107913009 107924311 107894274 106406187 106426396 106348386 102583906 102586395 102591139 102612106 102618662 102626409 107785532 107766305 107808821 5721745 5719074
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