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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   H1   histone H1 
 sly-r.6   H1   histone H1 
 sly-u.5   101245495   histone H1-like 
 sly-u.5   101248710   histone H1-like 
 sly-u.5   544142   H1 histone-like protein 
 sot-r.1   102586395   histone H1 
 sot-r.1   102583906   histone H1 
 nta-r.1   107830754   histone H1-like 
 nta-r.1   107808821   histone H1-like 
 nta-r.1   107807853   uncharacterized LOC107807853 
 ath-u.5   AT2G30620   winged-helix DNA-binding transcription factor family protein 
 ath-u.5   AT1G06760   winged-helix DNA-binding transcription factor family protein 
 ath-u.5   HIS1-3   histone H1-3 
 gma-u.5   100810590   histone H1.2-like 
 gma-u.5   100797229   histone H1 
 gma-u.5   100795994   histone H1 
 bra-r.6   103837838   histone H1 
 bra-r.6   103867940   histone H1.2 
 bra-r.6   103865059   histone H1.2 
 vvi-u.5   100259836   histone H1 
 vvi-u.5   100254064   histone H1 
 vvi-u.5   100251147   histone H1 
 ppo-u.5   7474614   histone H1-like 
 ppo-u.5   18101583   histone H1 
 ppo-u.5   7460433   histone H1 
 mtr-u.5   25484627   histone H1 
 mtr-u.5   25484336   histone H1 
 mtr-u.5   25501631   histone H1-like 
 ghi-r.1   107924311   histone H1 
 ghi-r.1   107894274   histone H1 
 ghi-r.1   107912347   histone H1 
 bna-r.1   106415530   histone H1.2 
 bna-r.1   111200897   histone H1 
 bna-r.1   106406187   histone H1.2-like 
 cit-r.1   102612106   histone H1 
 cit-r.1   102618662   histone H1-like 
 cit-r.1   102626409   histone H1 
 osa-u.5   4342583   histone H1 
 osa-u.5   4334439   histone H1 
 osa-u.5   4335314   histone H1 
 zma-u.5   542385   histone I 
 zma-u.5   541964   histone H1-like protein 
 zma-u.5   541973   histone one (H1) 101 
 tae-r.2   123123238   histone H1-like 
 tae-r.2   606312   histone H1-like 
 tae-r.2   123054118   histone H1-like 
 hvu-r.1   123452742   histone H1 
 hvu-r.1   123427443   histone H1-like 
 hvu-r.1   123452741   histone H1-like 
 sbi-r.1   8056631   histone H1 
 sbi-r.1   8057614   histone H1 
 sbi-r.1   8081244   histone H1 
 bdi-r.1   100829326   histone H1 
 bdi-r.1   100834570   histone H1 
 bdi-r.1   100833820   histone H1 
 cre-r.1   CHLRE_13g567450v5   uncharacterized protein 
 cre-r.1   CHLRE_06g275900v5   uncharacterized protein 

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Top 50 coexpressed genes to H1 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to H1 (sly-u.5 coexpression data)

CoexMap"778281"


slyH1 | Entrez gene ID : 778281      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 5 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045910 [list] [network] negative regulation of DNA recombination  (18 genes)  IEA  
GO:0030261 [list] [network] chromosome condensation  (21 genes)  IEA  
GO:0006334 [list] [network] nucleosome assembly  (45 genes)  IEA  
GO CC
GO:0000786 [list] [network] nucleosome  (80 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0031492 [list] [network] nucleosomal DNA binding  (14 genes)  IEA  
GO:0030527 [list] [network] structural constituent of chromatin  (65 genes)  IEA  
GO:0003690 [list] [network] double-stranded DNA binding  (545 genes)  IEA  
Protein NP_001233985.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for NP_001233985.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001233985.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
H1
sly-r.6
for
H1
sly-u.5
for
101245495
sly-u.5
for
101248710
sly-u.5
for
544142
sot-r.1
for
102586395
sot-r.1
for
102583906
nta-r.1
for
107830754
nta-r.1
for
107808821
nta-r.1
for
107807853
ath-u.5
for
AT2G30620
ath-u.5
for
AT1G06760
ath-u.5
for
HIS1-3
gma-u.5
for
100810590
gma-u.5
for
100797229
gma-u.5
for
100795994
bra-r.6
for
103837838
bra-r.6
for
103867940
bra-r.6
for
103865059
vvi-u.5
for
100259836
vvi-u.5
for
100254064
vvi-u.5
for
100251147
ppo-u.5
for
7474614
ppo-u.5
for
18101583
ppo-u.5
for
7460433
mtr-u.5
for
25484627
mtr-u.5
for
25484336
mtr-u.5
for
25501631
ghi-r.1
for
107924311
ghi-r.1
for
107894274
ghi-r.1
for
107912347
bna-r.1
for
106415530
bna-r.1
for
111200897
bna-r.1
for
106406187
cit-r.1
for
102612106
cit-r.1
for
102618662
cit-r.1
for
102626409
osa-u.5
for
4342583
osa-u.5
for
4334439
osa-u.5
for
4335314
zma-u.5
for
542385
zma-u.5
for
541964
zma-u.5
for
541973
tae-r.2
for
123123238
tae-r.2
for
606312
tae-r.2
for
123054118
hvu-r.1
for
123452742
hvu-r.1
for
123427443
hvu-r.1
for
123452741
sbi-r.1
for
8056631
sbi-r.1
for
8057614
sbi-r.1
for
8081244
bdi-r.1
for
100829326
bdi-r.1
for
100834570
bdi-r.1
for
100833820
cre-r.1
for
CHLRE_13g567450v5
cre-r.1
for
CHLRE_06g275900v5


Ortholog ID: 718
Species sly sly sly sot sot sot nta nta nta ath ath ath gma gma gma bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna cit cit cit osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre cre
Symbol H1 LOC101245495 LOC544142 LOC102586395 LOC102583906 LOC102591139 LOC107808821 LOC107766305 LOC107785532 AT2G30620 AT1G06760 HIS1-3 LOC100797229 LOC100775944 LOC100306187 LOC103837838 LOC103867940 LOC103857332 LOC100254064 LOC100251147 LOC100247613 LOC18101583 LOC7460433 LOC18099218 LOC25484335 LOC25484327 LOC107924311 LOC107894274 LOC107913009 LOC106406187 LOC106348386 LOC106426396 LOC102612106 LOC102618662 LOC102626409 LOC4342583 LOC4334439 LOC4335314 LOC541964 LOC541973 LOC103625810 LOC123054118 LOC123054116 LOC123123232 LOC123452742 LOC123452741 LOC123452756 LOC8056631 LOC8057614 LOC8081244 LOC100829326 LOC100834570 LOC100833820 CHLRE_13g567450v5 CHLRE_06g275900v5
Function* histone H1 histone H1-like H1 histone-like protein histone H1 histone H1 histone H1-like histone H1-like uncharacterized LOC107766305 histone H1.2 winged-helix DNA-binding transcription factor family protein winged-helix DNA-binding transcription factor family protein histone H1-3 histone H1 histone H1 H1/H5 domain-containing protein histone H1 histone H1.2 histone H1.2 histone H1 histone H1 histone H1 histone H1 histone H1 histone H1 histone H1 histone H1 histone H1 histone H1 histone H1 histone H1.2-like histone H1.2 histone H1.2 histone H1 histone H1-like histone H1 histone H1 histone H1 histone H1 histone H1-like protein histone one (H1) 101 histone H1-like histone H1-like histone H1-like histone H1-like histone H1 histone H1-like histone H1-like histone H1 histone H1 histone H1 histone H1 histone H1 histone H1 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 2
zma00670 One carbon pool by folate 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 778281 101245495 544142 102586395 102583906 102591139 107808821 107766305 107785532 817612 837187 816317 100797229 100775944 100306187 103837838 103867940 103857332 100254064 100251147 100247613 18101583 7460433 18099218 25484335 25484327 107924311 107894274 107913009 106406187 106348386 106426396 102612106 102618662 102626409 4342583 4334439 4335314 541964 541973 103625810 123054118 123054116 123123232 123452742 123452741 123452756 8056631 8057614 8081244 100829326 100834570 100833820 5719074 5721745
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