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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100830012   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 hvu-r.1   123442819   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 osa-u.5   4351063   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 zma-u.5   103630373   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 sbi-r.1   8058461   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 ath-u.5   AT4G14050   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100782048   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 sly-u.5   101250161   PPR protein MEF35-like 
 bra-r.6   103833779   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 vvi-u.5   100249938   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 mtr-u.5   11432733   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 ghi-r.1   107934432   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 ghi-r.1   107939127   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 sot-r.1   102600095   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 cit-r.1   102613341   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 nta-r.1   107826297   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 

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Top 50 coexpressed genes to 100830012 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100830012 (bdi-r.1 coexpression data)

CoexMap"100830012"


bdiLOC100830012 | Entrez gene ID : 100830012      
Species bdi hvu osa zma sbi ath gma sly bra vvi mtr ghi sot cit nta cre ppo tae bna
Paralog 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (707 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003568436.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_003568436.1)
Subcellular
localization
TargetP
chlo 6,  mito 4  (predict for XP_003568436.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100830012
hvu-r.1
for
123442819
osa-u.5
for
4351063
zma-u.5
for
103630373
sbi-r.1
for
8058461
ath-u.5
for
AT4G14050
gma-u.5
for
100782048
sly-u.5
for
101250161
bra-r.6
for
103833779
vvi-u.5
for
100249938
mtr-u.5
for
11432733
ghi-r.1
for
107934432
ghi-r.1
for
107939127
sot-r.1
for
102600095
cit-r.1
for
102613341
nta-r.1
for
107826297


Ortholog ID: 11704
Species bdi hvu osa zma sbi ath gma sly bra vvi mtr ghi ghi sot cit nta
Symbol LOC100830012 LOC123442819 LOC4351063 LOC103630373 LOC8058461 AT4G14050 LOC100782048 LOC101250161 LOC103833779 LOC100249938 LOC11432733 LOC107934432 LOC107939127 LOC102600095 LOC102613341 LOC107826297
Function* pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g14050, mitochondrial PPR protein MEF35-like pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 6
ghi03082 ATP-dependent chromatin remodeling 4
ghi00260 Glycine, serine and threonine metabolism 3
ghi00460 Cyanoamino acid metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 6
ghi03082 ATP-dependent chromatin remodeling 4
ghi00260 Glycine, serine and threonine metabolism 3
ghi00460 Cyanoamino acid metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100830012 123442819 4351063 103630373 8058461 827041 100782048 101250161 103833779 100249938 11432733 107934432 107939127 102600095 102613341 107826297
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