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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8058461   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 zma-u.5   103630373   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 osa-u.5   4351063   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 ath-u.5   AT4G14050   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100782048   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 sly-u.5   101250161   PPR protein MEF35-like 
 vvi-u.5   100249938   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 
 mtr-u.5   11432733   pentatricopeptide repeat-containing protein At4g14050, mitochondrial 

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Top 50 coexpressed genes to 8058461 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8058461 (sbi-r.1 coexpression data)

CoexMap"8058461"


sbiLOC8058461 | Entrez gene ID : 8058461    
Species sbi zma osa ath gma sly vvi mtr bra nta cre hvu cit bdi ppo sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (824 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002441110.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  cyto 1,  vacu 1,  cyto_mito 1,  mito_plas 1  (predict for XP_002441110.2)
Subcellular
localization
TargetP
mito 6  (predict for XP_002441110.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8058461

.
zma-u.5
for
103630373

.
osa-u.5
for
4351063

.
ath-u.5
for
AT4G14050

.
gma-u.5
for
100782048

.
sly-u.5
for
101250161

.
vvi-u.5
for
100249938

.
mtr-u.5
for
11432733

.


Ortholog ID: 11704
Species ath gma sly osa zma bra vvi mtr hvu ghi ghi sbi sot cit bdi nta
Symbol AT4G14050 LOC100782048 LOC101250161 LOC4351063 LOC103630373 LOC103833779 LOC100249938 LOC11432733 LOC123442819 LOC107939127 LOC107934432 LOC8058461 LOC102600095 LOC102613341 LOC100830012 LOC107826297
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g14050, mitochondrial PPR protein MEF35-like pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial pentatricopeptide repeat-containing protein At4g14050, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 6
ghi03082 ATP-dependent chromatin remodeling 4
ghi00260 Glycine, serine and threonine metabolism 3
ghi00460 Cyanoamino acid metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 6
ghi03082 ATP-dependent chromatin remodeling 4
ghi00260 Glycine, serine and threonine metabolism 3
ghi00460 Cyanoamino acid metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827041 100782048 101250161 4351063 103630373 103833779 100249938 11432733 123442819 107939127 107934432 8058461 102600095 102613341 100830012 107826297
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