ATTED-II : GeneCoexpression result

Species	Gene	Description
bdi-r.1	100830832	uncharacterized LOC100830832
osa-u.5	4330048	protein S40-4
osa-u.5	4336422	protein S40-4
zma-u.5	100277341	senescence regulator
zma-u.5	100276955	uncharacterized LOC100276955
zma-u.5	100278004	senescence regulator
ath-u.5	AT2G28400	senescence regulator (Protein of unknown function, DUF584)
ath-u.5	AT3G45210	transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)
ath-u.5	AT5G03230	senescence regulator (Protein of unknown function, DUF584)
gma-u.5	100817341	uncharacterized LOC100817341
gma-u.5	100814909	uncharacterized LOC100814909
gma-u.5	100812183	uncharacterized LOC100812183
sly-u.5	101262623	protein S40-4
sly-u.5	101259309	protein S40-4
vvi-u.5	100258555	protein S40-4
vvi-u.5	100253658	protein S40-4
ppo-u.5	7491132	uncharacterized LOC7491132
ppo-u.5	18100191	uncharacterized LOC18100191
ppo-u.5	18098197	uncharacterized LOC18098197
mtr-u.5	11420955	uncharacterized LOC11420955
mtr-u.5	11418064	uncharacterized LOC11418064
mtr-u.5	11409526	uncharacterized LOC11409526

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003571889.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, mito 1, nucl 1, extr 1, cyto_mito 1, mito_plas 1

(predict for XP_003571889.1)

Subcellular
localization
TargetP

mito 5

(predict for XP_003571889.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100830832	osa-u.5 for 4330048	osa-u.5 for 4336422	zma-u.5 for 100277341	zma-u.5 for 100276955	zma-u.5 for 100278004	ath-u.5 for AT2G28400	ath-u.5 for AT3G45210	ath-u.5 for AT5G03230	gma-u.5 for 100817341	gma-u.5 for 100814909	gma-u.5 for 100812183	sly-u.5 for 101262623	sly-u.5 for 101259309	vvi-u.5 for 100258555	vvi-u.5 for 100253658	ppo-u.5 for 7491132	ppo-u.5 for 18100191	ppo-u.5 for 18098197	mtr-u.5 for 11420955	mtr-u.5 for 11418064	mtr-u.5 for 11409526

Ortholog

Ortholog ID: 1072

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100830832

uncharacterized LOC100822702

uncharacterized LOC123181094

uncharacterized LOC123134252

uncharacterized LOC123402497

uncharacterized LOC123409720

protein S40-4

uncharacterized LOC103627537

senescence regulator

uncharacterized LOC8067405

transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)

ubiquitin carboxyl-terminal hydrolase 34

uncharacterized LOC100814909

protein S40-4

uncharacterized LOC103864886

uncharacterized LOC103845482

protein S40-4

uncharacterized LOC18098197

uncharacterized LOC7491132

uncharacterized LOC11420955

uncharacterized LOC11409526

uncharacterized LOC107936008

uncharacterized LOC107930409

uncharacterized LOC106372623

uncharacterized BNAC04G39750D

uncharacterized LOC102589274

uncharacterized LOC102591579

uncharacterized LOC102610402

uncharacterized LOC102625771

protein S40-4-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	5
ath00966	Glucosinolate biosynthesis	4
ath01210	2-Oxocarboxylic acid metabolism	4
ath00290	Valine, leucine and isoleucine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3
bra00330	Arginine and proline metabolism	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	3
ppo00230	Purine metabolism	3
ppo01232	Nucleotide metabolism	3
ppo01230	Biosynthesis of amino acids	3
ppo01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00030	Pentose phosphate pathway	5
ghi00710	Carbon fixation by Calvin cycle	5
ghi01200	Carbon metabolism	5
ghi01230	Biosynthesis of amino acids	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00906	Carotenoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

100830832

100822702

123181094

123134252

123402497

123409720

4336422

4330048

103627537

100277341

8067405

836189

823657

100793369

100814909

101262623

101259309

103864886

103845482

100253658

18098197

7491132

11420955

11409526

107936008

107930409

106372623

106446883

102589274

102591579

102610402

102625771

107761182

107759661

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100830832 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100830832 (bdi-r.1 coexpression data)


Species	bdi	osa	zma	ath	gma	sly	vvi	ppo	mtr	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	2	3	3	3	2	2	3	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100830832 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100830832 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**