ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100843189	uncharacterized LOC100843189
bdi-r.1	100830832	uncharacterized LOC100830832
bdi-r.1	100822702	uncharacterized LOC100822702
tae-r.2	123046095	uncharacterized LOC123046095
tae-r.2	123053976	uncharacterized LOC123053976
tae-r.2	123090739	uncharacterized LOC123090739
hvu-r.1	123402497	uncharacterized LOC123402497
hvu-r.1	123409720	uncharacterized LOC123409720
hvu-r.1	123430542	uncharacterized LOC123430542
osa-u.5	4330048	protein S40-4
osa-u.5	4336422	protein S40-4
zma-u.5	100277341	senescence regulator
zma-u.5	100276955	uncharacterized LOC100276955
zma-u.5	100278004	senescence regulator
sbi-r.1	8075939	heavy metal-associated isoprenylated plant protein 34
sbi-r.1	8067405	uncharacterized LOC8067405
ath-u.5	AT2G28400	senescence regulator (Protein of unknown function, DUF584)
ath-u.5	AT3G45210	transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)
ath-u.5	AT5G03230	senescence regulator (Protein of unknown function, DUF584)
gma-u.5	100817341	uncharacterized LOC100817341
gma-u.5	100814909	uncharacterized LOC100814909
gma-u.5	100812183	uncharacterized LOC100812183
sly-u.5	101262623	protein S40-4
sly-u.5	101259309	protein S40-4
bra-r.6	103851491	uncharacterized LOC103851491
bra-r.6	103855485	uncharacterized LOC103855485
bra-r.6	103864886	uncharacterized LOC103864886
vvi-u.5	100258555	protein S40-4
vvi-u.5	100253658	protein S40-4
ppo-u.5	7491132	uncharacterized LOC7491132
ppo-u.5	18100191	uncharacterized LOC18100191
ppo-u.5	18098197	uncharacterized LOC18098197
mtr-u.5	11420955	uncharacterized LOC11420955
mtr-u.5	11418064	uncharacterized LOC11418064
mtr-u.5	11409526	uncharacterized LOC11409526
ghi-r.1	107930409	uncharacterized LOC107930409
ghi-r.1	107932415	uncharacterized LOC107932415
ghi-r.1	107936008	uncharacterized LOC107936008
bna-r.1	111210067	uncharacterized LOC111210067
bna-r.1	125583318	uncharacterized LOC125583318
bna-r.1	106370395	uncharacterized LOC106370395
sot-r.1	102589274	uncharacterized LOC102589274
sot-r.1	102591579	uncharacterized LOC102591579
cit-r.1	102625771	uncharacterized LOC102625771
cit-r.1	102610402	uncharacterized LOC102610402
nta-r.1	107759595	protein S40-4
nta-r.1	107759661	protein S40-4-like
nta-r.1	107781994	protein S40-4-like

Top 50 coexpressed genes to 100843189 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100843189 (bdi-r.1 coexpression data)

CoexMap"100843189"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003575409.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, mito 3, nucl 2, cyto 1, pero 1, cyto_pero 1

(predict for XP_003575409.1)

Subcellular
localization
TargetP

mito 8

(predict for XP_003575409.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100843189	bdi-r.1 for 100830832	bdi-r.1 for 100822702	tae-r.2 for 123046095	tae-r.2 for 123053976	tae-r.2 for 123090739	hvu-r.1 for 123402497	hvu-r.1 for 123409720	hvu-r.1 for 123430542	osa-u.5 for 4330048	osa-u.5 for 4336422	zma-u.5 for 100277341	zma-u.5 for 100276955	zma-u.5 for 100278004	sbi-r.1 for 8075939	sbi-r.1 for 8067405	ath-u.5 for AT2G28400	ath-u.5 for AT3G45210	ath-u.5 for AT5G03230	gma-u.5 for 100817341	gma-u.5 for 100814909	gma-u.5 for 100812183	sly-u.5 for 101262623	sly-u.5 for 101259309	bra-r.6 for 103851491	bra-r.6 for 103855485	bra-r.6 for 103864886	vvi-u.5 for 100258555	vvi-u.5 for 100253658	ppo-u.5 for 7491132	ppo-u.5 for 18100191	ppo-u.5 for 18098197	mtr-u.5 for 11420955	mtr-u.5 for 11418064	mtr-u.5 for 11409526	ghi-r.1 for 107930409	ghi-r.1 for 107932415	ghi-r.1 for 107936008	bna-r.1 for 111210067	bna-r.1 for 125583318	bna-r.1 for 106370395	sot-r.1 for 102589274	sot-r.1 for 102591579	cit-r.1 for 102625771	cit-r.1 for 102610402	nta-r.1 for 107759595	nta-r.1 for 107759661	nta-r.1 for 107781994

Ortholog

Ortholog ID: 1072

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100843189

uncharacterized LOC100830832

uncharacterized LOC100822702

uncharacterized LOC123090739

uncharacterized LOC123134252

uncharacterized LOC123181094

uncharacterized LOC123402497

uncharacterized LOC123409720

uncharacterized LOC123430542

protein S40-4

senescence regulator

uncharacterized LOC100276955

uncharacterized LOC103627537

uncharacterized LOC8067405

transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)

senescence regulator (Protein of unknown function, DUF584)

transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)

uncharacterized LOC100814909

uncharacterized LOC100790091

ubiquitin carboxyl-terminal hydrolase 34

protein S40-4

uncharacterized LOC103855485

uncharacterized LOC103864886

uncharacterized LOC103845482

protein S40-4

uncharacterized LOC7491132

uncharacterized LOC18098197

uncharacterized LOC7467623

uncharacterized LOC11420955

uncharacterized LOC11418064

uncharacterized LOC11409526

uncharacterized LOC107930409

uncharacterized LOC107936008

uncharacterized LOC107948360

uncharacterized BNACNNG49210D

uncharacterized LOC106372623

uncharacterized BNAC04G39750D

uncharacterized LOC102589274

uncharacterized LOC102591579

uncharacterized LOC102600128

uncharacterized LOC102625771

uncharacterized LOC102610402

protein S40-4-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	5
ath00966	Glucosinolate biosynthesis	4
ath01210	2-Oxocarboxylic acid metabolism	4
ath00290	Valine, leucine and isoleucine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3
bra00330	Arginine and proline metabolism	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	3
ppo00230	Purine metabolism	3
ppo01232	Nucleotide metabolism	3
ppo01230	Biosynthesis of amino acids	3
ppo01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00030	Pentose phosphate pathway	5
ghi00710	Carbon fixation by Calvin cycle	5
ghi01200	Carbon metabolism	5
ghi01230	Biosynthesis of amino acids	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00906	Carotenoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

100843189

100830832

100822702

123090739

123134252

123181094

123402497

123409720

123430542

4330048

4336422

100277341

100276955

103627537

8067405

823657

831900

836189

100814909

100790091

100793369

101262623

101259309

103855485

103864886

103845482

100258555

100253658

7491132

18098197

7467623

11420955

11418064

11409526

107930409

107936008

107948360

106365756

106372623

106446883

102589274

102591579

102600128

102625771

102610402

107759661

107761182

107788351

The preparation time of this page was 0.2 [sec].


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	3	3	2	3	2	3	3	2	3	2	3	3	3	3	2	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100843189 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100843189 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**