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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100831056   superoxide dismutase [Cu-Zn], chloroplastic 
 osa-u.5   4346329   superoxide dismutase [Cu-Zn], chloroplastic-like 
 zma-u.5   100136885   Superoxide dismutase 
 ath-u.5   CSD2   copper/zinc superoxide dismutase 2 
 gma-u.5   100815376   superoxide dismutase [Cu-Zn], chloroplastic 
 gma-u.5   100784752   superoxide dismutase [Cu-Zn], chloroplastic 
 gma-u.5   100527058   uncharacterized LOC100527058 
 sly-u.5   SODCP.2   superoxide dismutase [Cu-Zn], chloroplastic 
 vvi-u.5   SODCP   Cu/Zn superoxide dismutase-like 
 ppo-u.5   18098251   superoxide dismutase [Cu-Zn], chloroplastic 
 ppo-u.5   7491174   superoxide dismutase [Cu-Zn], chloroplastic 
 mtr-u.5   11406426   superoxide dismutase [Cu-Zn], chloroplastic 

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Top 50 coexpressed genes to 100831056 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100831056 (bdi-r.1 coexpression data)

CoexMap"100831056"


bdiLOC100831056 | Entrez gene ID : 100831056      
Species bdi osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit sot tae bna ghi
Paralog 1 1 1 1 3 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi04146 [list] [network] Peroxisome (83 genes)
GO BP
GO:0019430 [list] [network] removal of superoxide radicals  (7 genes)  IEA  
GO CC
GO MF
GO:0004784 [list] [network] superoxide dismutase activity  (7 genes)  IEA  
GO:0005507 [list] [network] copper ion binding  (59 genes)  IEA  
Protein XP_003574947.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  mito 1  (predict for XP_003574947.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003574947.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100831056

.
osa-u.5
for
4346329

.
zma-u.5
for
100136885

.
ath-u.5
for
CSD2

.
gma-u.5
for
100815376

.
gma-u.5
for
100784752

.
gma-u.5
for
100527058

.
sly-u.5
for
SODCP.2

.
vvi-u.5
for
SODCP

.
ppo-u.5
for
18098251

.
ppo-u.5
for
7491174

.
mtr-u.5
for
11406426

.


Ortholog ID: 8892
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CSD2 LOC100815376 LOC100784752 SODCP.2 LOC4346329 LOC100136885 LOC103864828 SODCP LOC18098251 LOC7491174 LOC11406426 LOC543248 LOC123169213 LOC123408991 LOC107891599 LOC107889076 LOC106423933 LOC106446718 LOC8057804 LOC102605869 LOC102626642 LOC100831056 LOC107767528 LOC107806960
Function* copper/zinc superoxide dismutase 2 superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic-like Superoxide dismutase superoxide dismutase [Cu-Zn] 2, chloroplastic Cu/Zn superoxide dismutase-like superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn] 2, chloroplastic superoxide dismutase [Cu-Zn] 2, chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 5
gma03010 Ribosome 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00051 Fructose and mannose metabolism 2
gma00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 5
gma00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 11
sly03018 RNA degradation 2
sly04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04146 Peroxisome 3
osa03010 Ribosome 3
osa00860 Porphyrin metabolism 2
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04146 Peroxisome 3
vvi01200 Carbon metabolism 3
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00860 Porphyrin metabolism 4
ppo01240 Biosynthesis of cofactors 4
ppo04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr00190 Oxidative phosphorylation 2
mtr00051 Fructose and mannose metabolism 2
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 11
ghi04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 11
ghi04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 4
sbi04145 Phagosome 4
sbi01240 Biosynthesis of cofactors 3
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
cit04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta04146 Peroxisome 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta04146 Peroxisome 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817365 100815376 100784752 543981 4346329 100136885 103864828 100233100 18098251 7491174 11406426 543248 123169213 123408991 107891599 107889076 106423933 106446718 8057804 102605869 102626642 100831056 107767528 107806960
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