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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107891599   superoxide dismutase [Cu-Zn], chloroplastic 
 ghi-r.1   107889076   superoxide dismutase [Cu-Zn], chloroplastic 
 ghi-r.1   121229296   superoxide dismutase [Cu-Zn], chloroplastic 
 ath-u.5   CSD2   copper/zinc superoxide dismutase 2 
 bra-r.6   103864828   superoxide dismutase [Cu-Zn] 2, chloroplastic 
 bna-r.1   106423933   superoxide dismutase [Cu-Zn] 2, chloroplastic 
 bna-r.1   106446718   superoxide dismutase [Cu-Zn] 2, chloroplastic 
 cit-r.1   102626642   superoxide dismutase [Cu-Zn], chloroplastic 
 gma-u.5   100815376   superoxide dismutase [Cu-Zn], chloroplastic 
 gma-u.5   100784752   superoxide dismutase [Cu-Zn], chloroplastic 
 gma-u.5   100527058   uncharacterized LOC100527058 
 vvi-u.5   SODCP   Cu/Zn superoxide dismutase-like 
 ppo-u.5   18098251   superoxide dismutase [Cu-Zn], chloroplastic 
 ppo-u.5   7491174   superoxide dismutase [Cu-Zn], chloroplastic 
 mtr-u.5   11406426   superoxide dismutase [Cu-Zn], chloroplastic 
 sly-u.5   SODCP.2   superoxide dismutase [Cu-Zn], chloroplastic 
 sot-r.1   102605869   superoxide dismutase [Cu-Zn], chloroplastic 
 nta-r.1   107767528   superoxide dismutase [Cu-Zn], chloroplastic 
 nta-r.1   107806960   superoxide dismutase [Cu-Zn], chloroplastic 
 osa-u.5   4346329   superoxide dismutase [Cu-Zn], chloroplastic-like 
 zma-u.5   100136885   Superoxide dismutase 
 tae-r.2   123169213   superoxide dismutase [Cu-Zn], chloroplastic 
 tae-r.2   123154930   superoxide dismutase [Cu-Zn], chloroplastic 
 tae-r.2   543248   superoxide dismutase [Cu-Zn], chloroplastic 
 hvu-r.1   123408991   superoxide dismutase [Cu-Zn], chloroplastic 
 sbi-r.1   8057804   superoxide dismutase [Cu-Zn], chloroplastic 
 bdi-r.1   100831056   superoxide dismutase [Cu-Zn], chloroplastic 

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Top 50 coexpressed genes to 107891599 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107891599 (ghi-r.1 coexpression data)

CoexMap"107891599"


ghiLOC107891599 | Entrez gene ID : 107891599    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 2 1 3 1 2 1 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04146 [list] [network] Peroxisome (210 genes)
GO BP
GO:0006801 [list] [network] superoxide metabolic process  (24 genes)  IEA  
GO CC
GO MF
GO:0005507 [list] [network] copper ion binding  (202 genes)  IEA  
Protein XP_016671933.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  mito 1  (predict for XP_016671933.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016671933.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107891599
ghi-r.1
for
107889076
ghi-r.1
for
121229296
ath-u.5
for
CSD2
bra-r.6
for
103864828
bna-r.1
for
106423933
bna-r.1
for
106446718
cit-r.1
for
102626642
gma-u.5
for
100815376
gma-u.5
for
100784752
gma-u.5
for
100527058
vvi-u.5
for
SODCP
ppo-u.5
for
18098251
ppo-u.5
for
7491174
mtr-u.5
for
11406426
sly-u.5
for
SODCP.2
sot-r.1
for
102605869
nta-r.1
for
107767528
nta-r.1
for
107806960
osa-u.5
for
4346329
zma-u.5
for
100136885
tae-r.2
for
123169213
tae-r.2
for
123154930
tae-r.2
for
543248
hvu-r.1
for
123408991
sbi-r.1
for
8057804
bdi-r.1
for
100831056


Ortholog ID: 8892
Species ghi ghi ghi ath bra bna bna cit gma gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107891599 LOC107889076 LOC121229296 CSD2 LOC103864828 LOC106423933 LOC106446718 LOC102626642 LOC100815376 LOC100784752 LOC100527058 SODCP LOC18098251 LOC7491174 LOC11406426 SODCP.2 LOC102605869 LOC107767528 LOC107806960 LOC4346329 LOC100136885 LOC123169213 LOC123154930 LOC543248 LOC123408991 LOC8057804 LOC100831056
Function* superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic copper/zinc superoxide dismutase 2 superoxide dismutase [Cu-Zn] 2, chloroplastic superoxide dismutase [Cu-Zn] 2, chloroplastic superoxide dismutase [Cu-Zn] 2, chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic uncharacterized LOC100527058 Cu/Zn superoxide dismutase-like superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic-like Superoxide dismutase superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic superoxide dismutase [Cu-Zn], chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 11
ghi04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 11
ghi04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 7
ghi04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
cit04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 5
gma03010 Ribosome 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00051 Fructose and mannose metabolism 2
gma00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 5
gma00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 5
gma03010 Ribosome 4
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04146 Peroxisome 3
vvi01200 Carbon metabolism 3
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00860 Porphyrin metabolism 4
ppo01240 Biosynthesis of cofactors 4
ppo04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr00190 Oxidative phosphorylation 2
mtr00051 Fructose and mannose metabolism 2
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 11
sly03018 RNA degradation 2
sly04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta04146 Peroxisome 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta04146 Peroxisome 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04146 Peroxisome 3
osa03010 Ribosome 3
osa00860 Porphyrin metabolism 2
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 4
sbi04145 Phagosome 4
sbi01240 Biosynthesis of cofactors 3
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107891599 107889076 121229296 817365 103864828 106423933 106446718 102626642 100815376 100784752 100527058 100233100 18098251 7491174 11406426 543981 102605869 107767528 107806960 4346329 100136885 123169213 123154930 543248 123408991 8057804 100831056
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