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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100831726   RNA polymerase II-associated protein 3-like 
 bdi-r.1   100839818   RNA polymerase II-associated protein 3 
 bdi-r.1   100837285   RNA polymerase II-associated protein 3 
 tae-r.2   123110115   RNA polymerase II-associated protein 3 
 tae-r.2   123180301   RNA polymerase II-associated protein 3 
 tae-r.2   123189819   RNA polymerase II-associated protein 3 
 hvu-r.1   123415986   RNA polymerase II-associated protein 3 
 osa-u.5   4337703   uncharacterized LOC4337703 
 zma-u.5   100192799   uncharacterized LOC100192799 
 sbi-r.1   8068173   RNA polymerase II-associated protein 3 
 ath-u.5   TPR5   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100808255   RNA polymerase II-associated protein 3 
 gma-u.5   100789345   RNA polymerase II-associated protein 3 
 gma-u.5   100787266   protein SEMI-ROLLED LEAF 2 
 sly-u.5   101250936   uncharacterized LOC101250936 
 bra-r.6   103847644   RNA polymerase II-associated protein 3 
 bra-r.6   103849452   RNA polymerase II-associated protein 3 
 vvi-u.5   100242521   uncharacterized LOC100242521 
 ppo-u.5   18104012   uncharacterized LOC18104012 
 ppo-u.5   18098586   uncharacterized LOC18098586 
 mtr-u.5   25484695   RNA polymerase II-associated protein 3 
 ghi-r.1   107927305   RNA polymerase II-associated protein 3 
 ghi-r.1   107886346   RNA polymerase II-associated protein 3 
 bna-r.1   111213935   RNA polymerase II-associated protein 3 
 bna-r.1   106390940   RNA polymerase II-associated protein 3-like 
 bna-r.1   125585316   RNA polymerase II-associated protein 3-like 
 sot-r.1   102604898   RNA polymerase II-associated protein 3 
 cit-r.1   102623910   uncharacterized LOC102623910 
 nta-r.1   107767865   uncharacterized LOC107767865 
 nta-r.1   107830436   uncharacterized LOC107830436 
 cre-r.1   CHLRE_02g084900v5   uncharacterized protein 

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Top 50 coexpressed genes to 100831726 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100831726 (bdi-r.1 coexpression data)

CoexMap"100831726"


bdiLOC100831726 | Entrez gene ID : 100831726    
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 3 1 1 1 1 1 3 1 2 1 2 1 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_024315808.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto_nucl 3,  mito 2  (predict for XP_024315808.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for XP_024315808.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100831726
bdi-r.1
for
100839818
bdi-r.1
for
100837285
tae-r.2
for
123110115
tae-r.2
for
123180301
tae-r.2
for
123189819
hvu-r.1
for
123415986
osa-u.5
for
4337703
zma-u.5
for
100192799
sbi-r.1
for
8068173
ath-u.5
for
TPR5
gma-u.5
for
100808255
gma-u.5
for
100789345
gma-u.5
for
100787266
sly-u.5
for
101250936
bra-r.6
for
103847644
bra-r.6
for
103849452
vvi-u.5
for
100242521
ppo-u.5
for
18104012
ppo-u.5
for
18098586
mtr-u.5
for
25484695
ghi-r.1
for
107927305
ghi-r.1
for
107886346
bna-r.1
for
111213935
bna-r.1
for
106390940
bna-r.1
for
125585316
sot-r.1
for
102604898
cit-r.1
for
102623910
nta-r.1
for
107767865
nta-r.1
for
107830436
cre-r.1
for
CHLRE_02g084900v5


Ortholog ID: 7078
Species bdi bdi bdi tae tae tae hvu osa zma sbi ath gma gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC100831726 LOC100839818 LOC100837285 LOC123110115 LOC123180301 LOC123189819 LOC123415986 LOC4337703 LOC100192799 LOC8068173 TPR5 LOC100808255 LOC100789345 LOC100787266 LOC101250936 LOC103847644 LOC103849452 LOC100242521 LOC18104012 LOC18098586 LOC25484695 LOC107927305 LOC107886346 LOC111213935 LOC106390940 LOC125585316 LOC102604898 LOC102623910 LOC107767865 LOC107830436 CHLRE_02g084900v5
Function* RNA polymerase II-associated protein 3-like RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 uncharacterized LOC4337703 uncharacterized LOC100192799 RNA polymerase II-associated protein 3 Tetratricopeptide repeat (TPR)-like superfamily protein RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 protein SEMI-ROLLED LEAF 2 uncharacterized LOC101250936 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 uncharacterized LOC100242521 uncharacterized LOC18104012 uncharacterized LOC18098586 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3-like RNA polymerase II-associated protein 3-like RNA polymerase II-associated protein 3 uncharacterized LOC102623910 uncharacterized LOC107767865 uncharacterized LOC107830436 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03015 mRNA surveillance pathway 2
hvu03018 RNA degradation 2
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 3
osa03018 RNA degradation 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03020 RNA polymerase 2
sbi03420 Nucleotide excision repair 2
sbi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 11
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 11
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 2
bna00062 Fatty acid elongation 2
bna01212 Fatty acid metabolism 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 2
bna00062 Fatty acid elongation 2
bna01212 Fatty acid metabolism 2
bna00540 Lipopolysaccharide biosynthesis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 2
bna00062 Fatty acid elongation 2
bna01212 Fatty acid metabolism 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100831726 100839818 100837285 123110115 123180301 123189819 123415986 4337703 100192799 8068173 842097 100808255 100789345 100787266 101250936 103847644 103849452 100242521 18104012 18098586 25484695 107927305 107886346 111213935 106390940 125585316 102604898 102623910 107767865 107830436 5727369
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