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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101250936   uncharacterized LOC101250936 
 sly-r.6   101250936   uncharacterized LOC101250936 
 ath-u.5   TPR5   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100808255   RNA polymerase II-associated protein 3 
 gma-u.5   100789345   RNA polymerase II-associated protein 3 
 gma-u.5   100787266   protein SEMI-ROLLED LEAF 2 
 vvi-u.5   100242521   uncharacterized LOC100242521 
 ppo-u.5   18098586   uncharacterized LOC18098586 
 ppo-u.5   18104012   uncharacterized LOC18104012 
 mtr-u.5   25484695   RNA polymerase II-associated protein 3 
 osa-u.5   4337703   uncharacterized LOC4337703 
 zma-u.5   100192799   uncharacterized LOC100192799 

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Top 50 coexpressed genes to 101250936 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101250936 (sly-u.5 coexpression data)

CoexMap"101250936"


slyLOC101250936 | Entrez gene ID : 101250936      
Species sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 2 1 3 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004248819.1 [sequence] [blastp]
XP_010327508.1 [sequence] [blastp]
XP_010327509.1 [sequence] [blastp]
XP_019071657.1 [sequence] [blastp]
XP_025883469.1 [sequence] [blastp]
XP_069145799.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  cyto 2,  mito 2,  nucl_plas 2,  nucl 1,  plas 1  (predict for XP_004248819.1)
chlo 4,  cyto 2,  mito 2,  nucl_plas 1,  nucl 1,  plas 1,  cyto_mito 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_010327508.1)
cyto_nucl 3,  chlo 3,  nucl 3,  cyto 2,  nucl_plas 2,  plas 1  (predict for XP_010327509.1)
chlo 4,  nucl_plas 2,  mito 2,  plas 2,  nucl 1  (predict for XP_019071657.1)
cyto 4,  cyto_nucl 4,  nucl 2,  chlo 2  (predict for XP_025883469.1)
cyto 4,  cyto_nucl 4,  nucl 2,  chlo 2,  mito 1,  plas 1,  mito_plas 1  (predict for XP_069145799.1)
Subcellular
localization
TargetP
other 8  (predict for XP_004248819.1)
other 8  (predict for XP_010327508.1)
other 8  (predict for XP_010327509.1)
other 8  (predict for XP_019071657.1)
other 8  (predict for XP_025883469.1)
other 8  (predict for XP_069145799.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101250936
sly-r.6
for
101250936
ath-u.5
for
TPR5
gma-u.5
for
100808255
gma-u.5
for
100789345
gma-u.5
for
100787266
vvi-u.5
for
100242521
ppo-u.5
for
18098586
ppo-u.5
for
18104012
mtr-u.5
for
25484695
osa-u.5
for
4337703
zma-u.5
for
100192799


Ortholog ID: 7078
Species sly sot nta nta ath gma gma bra bra vvi ppo ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi bdi cre
Symbol LOC101250936 LOC102604898 LOC107767865 LOC107830436 TPR5 LOC100808255 LOC100787266 LOC103847644 LOC103849452 LOC100242521 LOC18098586 LOC18104012 LOC25484695 LOC107927305 LOC107886346 LOC111213935 LOC106390940 LOC102623910 LOC4337703 LOC100192799 LOC123180301 LOC123189819 LOC123415986 LOC8068173 LOC100839818 LOC100837285 CHLRE_02g084900v5
Function* uncharacterized LOC101250936 RNA polymerase II-associated protein 3 uncharacterized LOC107767865 uncharacterized LOC107830436 Tetratricopeptide repeat (TPR)-like superfamily protein RNA polymerase II-associated protein 3 protein SEMI-ROLLED LEAF 2 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 uncharacterized LOC100242521 uncharacterized LOC18098586 uncharacterized LOC18104012 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3-like uncharacterized LOC102623910 uncharacterized LOC4337703 uncharacterized LOC100192799 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 RNA polymerase II-associated protein 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 11
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 11
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 2
bna00062 Fatty acid elongation 2
bna01212 Fatty acid metabolism 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 2
bna00062 Fatty acid elongation 2
bna01212 Fatty acid metabolism 2
bna00540 Lipopolysaccharide biosynthesis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 3
osa03018 RNA degradation 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03015 mRNA surveillance pathway 2
hvu03018 RNA degradation 2
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03020 RNA polymerase 2
sbi03420 Nucleotide excision repair 2
sbi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101250936 102604898 107767865 107830436 842097 100808255 100787266 103847644 103849452 100242521 18098586 18104012 25484695 107927305 107886346 111213935 106390940 102623910 4337703 100192799 123180301 123189819 123415986 8068173 100839818 100837285 5727369
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