ATTED-II : GeneCoexpression result

Species	Gene	Description
bdi-r.1	100831732	uncharacterized LOC100831732
tae-r.2	123061788	NKAP family protein UM04995
tae-r.2	123078888	splicing factor, suppressor of white-apricot homolog
tae-r.2	123070467	uncharacterized LOC123070467
hvu-r.1	123444207	splicing factor, suppressor of white-apricot homolog
osa-u.5	4325296	uncharacterized LOC4325296
zma-u.5	100383427	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
sbi-r.1	8068064	splicing factor, suppressor of white-apricot homolog
ath-u.5	AT5G55100	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
gma-u.5	100801276	splicing factor, suppressor of white-apricot homolog
gma-u.5	100791165	splicing factor, suppressor of white-apricot homolog
sly-u.5	101250744	uncharacterized LOC101250744
bra-r.6	103851906	splicing factor, suppressor of white-apricot homolog
vvi-u.5	100250252	uncharacterized LOC100250252
ppo-u.5	7478709	uncharacterized LOC7478709
mtr-u.5	11425876	protein suppressor of white apricot
ghi-r.1	107932757	protein suppressor of white apricot
ghi-r.1	107903459	splicing factor, suppressor of white-apricot homolog
bna-r.1	106390010	splicing factor, suppressor of white-apricot homolog
bna-r.1	125581532	splicing factor, suppressor of white-apricot homolog
sot-r.1	102593692	splicing factor, suppressor of white-apricot homolog
cit-r.1	102619096	uncharacterized LOC102619096
nta-r.1	107786983	uncharacterized LOC107786983
nta-r.1	142182631	uncharacterized LOC142182631
cre-r.1	CHLRE_11g481700v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0000395 [list] [network] mRNA 5'-splice site recognition	(4 genes)	IEA
GO:0006396 [list] [network] RNA processing	(591 genes)	IEA

GO CC

GO MF

GO:0003723 [list] [network] RNA binding

(1239 genes)

IEA

Protein

XP_010232192.1 [sequence] [blastp]
XP_010232193.1 [sequence] [blastp]
XP_010232194.1 [sequence] [blastp]
XP_010232195.1 [sequence] [blastp]
XP_010232196.1 [sequence] [blastp]
XP_024314919.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, chlo 1, cyto 1	(predict for XP_010232192.1)
nucl 9, chlo 1, cyto 1	(predict for XP_010232193.1)
nucl 10	(predict for XP_010232194.1)
nucl 10	(predict for XP_010232195.1)
nucl 10	(predict for XP_010232196.1)
nucl 10	(predict for XP_024314919.1)

Subcellular
localization
TargetP

other 6, chlo 3	(predict for XP_010232192.1)
other 6, chlo 3	(predict for XP_010232193.1)
other 8	(predict for XP_010232194.1)
other 8	(predict for XP_010232195.1)
other 5	(predict for XP_010232196.1)
other 8	(predict for XP_024314919.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100831732	tae-r.2 for 123061788	tae-r.2 for 123078888	tae-r.2 for 123070467	hvu-r.1 for 123444207	osa-u.5 for 4325296	zma-u.5 for 100383427	sbi-r.1 for 8068064	ath-u.5 for AT5G55100	gma-u.5 for 100801276	gma-u.5 for 100791165	sly-u.5 for 101250744	bra-r.6 for 103851906	vvi-u.5 for 100250252	ppo-u.5 for 7478709	mtr-u.5 for 11425876	ghi-r.1 for 107932757	ghi-r.1 for 107903459	bna-r.1 for 106390010	bna-r.1 for 125581532	sot-r.1 for 102593692	cit-r.1 for 102619096	nta-r.1 for 107786983	nta-r.1 for 142182631	cre-r.1 for CHLRE_11g481700v5

Ortholog

Ortholog ID: 10398

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC100831732

NKAP family protein UM04995