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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100833141   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 tae-r.2   123052821   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 tae-r.2   123188687   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 tae-r.2   123044941   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 hvu-r.1   123426161   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 osa-u.5   4342467   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 zma-u.5   100194398   uncharacterized LOC100194398 
 sbi-r.1   8081158   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 ath-u.5   EMB2247   protein EMBRYO DEFECTIVE 2247 
 gma-u.5   100818869   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 sly-u.5   101264294   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 bra-r.6   103846304   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 vvi-u.5   100253666   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 vvi-u.5   100260814   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 vvi-u.5   100249893   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 ppo-u.5   18099392   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 mtr-u.5   25495825   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 ghi-r.1   107934601   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 ghi-r.1   107942342   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 bna-r.1   106371987   valine--tRNA ligase, chloroplastic/mitochondrial 2-like 
 bna-r.1   106387684   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 sot-r.1   102583318   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 cit-r.1   102627172   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 nta-r.1   107808232   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 nta-r.1   107803237   valine--tRNA ligase, chloroplastic/mitochondrial 2 
 cre-r.1   CHLRE_07g350500v5   uncharacterized protein 

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Top 50 coexpressed genes to 100833141 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100833141 (bdi-r.1 coexpression data)

CoexMap"100833141"


bdiLOC100833141 | Entrez gene ID : 100833141      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 1 1 1 3 1 1 2 2 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi00970 [list] [network] Aminoacyl-tRNA biosynthesis (88 genes)
GO BP
GO:0006438 [list] [network] valyl-tRNA aminoacylation  (2 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (825 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4615 genes)  IEA  
GO MF
GO:0004832 [list] [network] valine-tRNA ligase activity  (2 genes)  IEA  
GO:0002161 [list] [network] aminoacyl-tRNA deacylase activity  (13 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1995 genes)  IEA  
Protein XP_010228358.1 [sequence] [blastp]
XP_010228359.1 [sequence] [blastp]
XP_024313553.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_010228358.1)
chlo 5,  mito 4,  cyto 1  (predict for XP_010228359.1)
cyto 6,  nucl 2,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_024313553.1)
Subcellular
localization
TargetP
chlo 8,  mito 5  (predict for XP_010228358.1)
mito 8,  other 3  (predict for XP_010228359.1)
mito 7,  other 4  (predict for XP_024313553.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100833141
tae-r.2
for
123052821
tae-r.2
for
123188687
tae-r.2
for
123044941
hvu-r.1
for
123426161
osa-u.5
for
4342467
zma-u.5
for
100194398
sbi-r.1
for
8081158
ath-u.5
for
EMB2247
gma-u.5
for
100818869
sly-u.5
for
101264294
bra-r.6
for
103846304
vvi-u.5
for
100253666
vvi-u.5
for
100260814
vvi-u.5
for
100249893
ppo-u.5
for
18099392
mtr-u.5
for
25495825
ghi-r.1
for
107934601
ghi-r.1
for
107942342
bna-r.1
for
106371987
bna-r.1
for
106387684
sot-r.1
for
102583318
cit-r.1
for
102627172
nta-r.1
for
107808232
nta-r.1
for
107803237
cre-r.1
for
CHLRE_07g350500v5


Ortholog ID: 9667
Species bdi tae tae tae hvu osa zma sbi ath gma sly bra vvi vvi vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100833141 LOC123052821 LOC123188687 LOC123044941 LOC123426161 LOC4342467 LOC100194398 LOC8081158 EMB2247 LOC100818869 LOC101264294 LOC103846304 LOC100253666 LOC100260814 LOC100249893 LOC18099392 LOC25495825 LOC107934601 LOC107942342 LOC106371987 LOC106387684 LOC102583318 LOC102627172 LOC107808232 LOC107803237 CHLRE_07g350500v5
Function* valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2 uncharacterized LOC100194398 valine--tRNA ligase, chloroplastic/mitochondrial 2 protein EMBRYO DEFECTIVE 2247 valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2-like valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2 valine--tRNA ligase, chloroplastic/mitochondrial 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 7
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 4
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 3
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 3
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03060 Protein export 3
mtr00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
cit00500 Starch and sucrose metabolism 2
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 4
cre00970 Aminoacyl-tRNA biosynthesis 3
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
cre00260 Glycine, serine and threonine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100833141 123052821 123188687 123044941 123426161 4342467 100194398 8081158 831533 100818869 101264294 103846304 100253666 100260814 100249893 18099392 25495825 107934601 107942342 106371987 106387684 102583318 102627172 107808232 107803237 5718181
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