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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100833411   aromatic-L-amino-acid decarboxylase 
 bdi-r.1   112271623   aromatic-L-amino-acid decarboxylase-like 
 bdi-r.1   100832786   aromatic-L-amino-acid decarboxylase 
 bdi-r.1   100832473   aromatic-L-amino-acid decarboxylase 
 tae-r.2   123086471   tryptophan decarboxylase 1 
 tae-r.2   123150173   tryptophan decarboxylase 1 
 hvu-r.1   123410774   tryptophan decarboxylase 1-like 
 hvu-r.1   123412543   tryptophan decarboxylase 1-like 
 osa-u.5   4344636   tryptophan decarboxylase 1-like 
 osa-u.5   4344637   tryptophan decarboxylase 1-like 
 zma-u.5   100383025   Tyrosine decarboxylase 1 
 sbi-r.1   8067813   aromatic-L-amino-acid decarboxylase 
 sbi-r.1   8067812   aromatic-L-amino-acid decarboxylase 
 sly-u.5   101251901   tryptophan decarboxylase TDC1 
 ghi-r.1   121203656   tryptophan decarboxylase TDC1 
 ghi-r.1   107928801   tryptophan decarboxylase TDC2 
 sot-r.1   102587268   aromatic-L-amino-acid decarboxylase-like 
 sot-r.1   102600956   aromatic-L-amino-acid decarboxylase-like 
 cit-r.1   102607021   tryptophan decarboxylase TDC2-like 

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Top 50 coexpressed genes to 100833411 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100833411 (bdi-r.1 coexpression data)

CoexMap"100833411"


bdiLOC100833411 | Entrez gene ID : 100833411      
Species bdi tae hvu osa zma sbi sly ghi sot cit nta vvi bra ppo bna ath mtr gma cre
Paralog 4 2 2 2 1 2 1 2 2 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi00350 [list] [network] Tyrosine metabolism (50 genes)
bdi00360 [list] [network] Phenylalanine metabolism (39 genes)
bdi00380 [list] [network] Tryptophan metabolism (55 genes)
bdi00901 [list] [network] Indole alkaloid biosynthesis (9 genes)
bdi00950 [list] [network] Isoquinoline alkaloid biosynthesis (26 genes)
bdi00965 [list] [network] Betalain biosynthesis (9 genes)
GO BP
GO:0006520 [list] [network] amino acid metabolic process  (316 genes)  IEA  
GO CC
GO MF
GO:0016831 [list] [network] carboxy-lyase activity  (61 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (88 genes)  IEA  
Protein XP_003573368.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 1,  nucl 1,  plas 1,  pero 1,  cysk 1,  chlo_mito 1,  cysk_plas 1  (predict for XP_003573368.1)
Subcellular
localization
TargetP
other 9  (predict for XP_003573368.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100833411
bdi-r.1
for
112271623
bdi-r.1
for
100832786
bdi-r.1
for
100832473
tae-r.2
for
123086471
tae-r.2
for
123150173
hvu-r.1
for
123410774
hvu-r.1
for
123412543
osa-u.5
for
4344636
osa-u.5
for
4344637
zma-u.5
for
100383025
sbi-r.1
for
8067813
sbi-r.1
for
8067812
sly-u.5
for
101251901
ghi-r.1
for
121203656
ghi-r.1
for
107928801
sot-r.1
for
102587268
sot-r.1
for
102600956
cit-r.1
for
102607021


Ortholog ID: 2687
Species bdi bdi bdi tae tae hvu hvu hvu osa osa zma sbi sbi sly ghi ghi sot sot cit
Symbol LOC100833411 LOC112271623 LOC100832786 LOC123152136 LOC123152137 LOC123410774 LOC123412543 LOC123405419 LOC4344636 LOC4344637 LOC100383025 LOC8067813 LOC8067812 LOC101251901 LOC121203656 LOC107928801 LOC102587268 LOC102600956 LOC102607021
Function* aromatic-L-amino-acid decarboxylase aromatic-L-amino-acid decarboxylase-like aromatic-L-amino-acid decarboxylase tryptophan decarboxylase 1 tryptophan decarboxylase 1 tryptophan decarboxylase 1-like tryptophan decarboxylase 1-like tryptophan decarboxylase 1-like tryptophan decarboxylase 1-like tryptophan decarboxylase 1-like Tyrosine decarboxylase 1 aromatic-L-amino-acid decarboxylase aromatic-L-amino-acid decarboxylase tryptophan decarboxylase TDC1 tryptophan decarboxylase TDC1 tryptophan decarboxylase TDC2 aromatic-L-amino-acid decarboxylase-like aromatic-L-amino-acid decarboxylase-like tryptophan decarboxylase TDC2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00350 Tyrosine metabolism 6
bdi00360 Phenylalanine metabolism 6
bdi00380 Tryptophan metabolism 6
bdi00901 Indole alkaloid biosynthesis 6
bdi00950 Isoquinoline alkaloid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00350 Tyrosine metabolism 6
bdi00360 Phenylalanine metabolism 6
bdi00380 Tryptophan metabolism 6
bdi00901 Indole alkaloid biosynthesis 6
bdi00950 Isoquinoline alkaloid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00350 Tyrosine metabolism 6
bdi00360 Phenylalanine metabolism 6
bdi00380 Tryptophan metabolism 6
bdi00901 Indole alkaloid biosynthesis 6
bdi00950 Isoquinoline alkaloid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00350 Tyrosine metabolism 10
tae00360 Phenylalanine metabolism 10
tae00380 Tryptophan metabolism 10
tae00901 Indole alkaloid biosynthesis 10
tae00950 Isoquinoline alkaloid biosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00350 Tyrosine metabolism 15
tae00360 Phenylalanine metabolism 15
tae00380 Tryptophan metabolism 15
tae00901 Indole alkaloid biosynthesis 15
tae00950 Isoquinoline alkaloid biosynthesis 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00350 Tyrosine metabolism 7
hvu00360 Phenylalanine metabolism 7
hvu00380 Tryptophan metabolism 7
hvu00901 Indole alkaloid biosynthesis 7
hvu00950 Isoquinoline alkaloid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00350 Tyrosine metabolism 7
hvu00360 Phenylalanine metabolism 7
hvu00380 Tryptophan metabolism 7
hvu00901 Indole alkaloid biosynthesis 7
hvu00950 Isoquinoline alkaloid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00350 Tyrosine metabolism 7
hvu00360 Phenylalanine metabolism 7
hvu00380 Tryptophan metabolism 7
hvu00901 Indole alkaloid biosynthesis 7
hvu00950 Isoquinoline alkaloid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa02010 ABC transporters 2
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
osa01230 Biosynthesis of amino acids 2
osa00350 Tyrosine metabolism 2
osa00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
osa01230 Biosynthesis of amino acids 6
osa00380 Tryptophan metabolism 3
osa00260 Glycine, serine and threonine metabolism 2
osa00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00909 Sesquiterpenoid and triterpenoid biosynthesis 2
zma00350 Tyrosine metabolism 2
zma00360 Phenylalanine metabolism 2
zma00380 Tryptophan metabolism 2
zma00901 Indole alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
sbi01230 Biosynthesis of amino acids 6
sbi00860 Porphyrin metabolism 2
sbi00350 Tyrosine metabolism 2
sbi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
sbi01230 Biosynthesis of amino acids 6
sbi00860 Porphyrin metabolism 2
sbi00350 Tyrosine metabolism 2
sbi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00350 Tyrosine metabolism 2
sly00360 Phenylalanine metabolism 2
sly00380 Tryptophan metabolism 2
sly00901 Indole alkaloid biosynthesis 2
sly00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi00380 Tryptophan metabolism 2
ghi00901 Indole alkaloid biosynthesis 2
ghi00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi00380 Tryptophan metabolism 2
ghi00901 Indole alkaloid biosynthesis 2
ghi00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00520 Amino sugar and nucleotide sugar metabolism 8
sot04016 MAPK signaling pathway - plant 8
sot00480 Glutathione metabolism 5
sot00350 Tyrosine metabolism 3
sot00360 Phenylalanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00520 Amino sugar and nucleotide sugar metabolism 8
sot04016 MAPK signaling pathway - plant 8
sot00350 Tyrosine metabolism 3
sot00360 Phenylalanine metabolism 3
sot00380 Tryptophan metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
cit03030 DNA replication 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100833411 112271623 100832786 123152136 123152137 123410774 123412543 123405419 4344636 4344637 100383025 8067813 8067812 101251901 121203656 107928801 102587268 102600956 102607021
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