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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107928801   tryptophan decarboxylase TDC2 
 sly-u.5   101251901   tryptophan decarboxylase TDC1 
 osa-u.5   4344636   tryptophan decarboxylase 1-like 
 osa-u.5   4344637   tryptophan decarboxylase 1-like 
 zma-u.5   100279950   Tyrosine decarboxylase 1 
 zma-u.5   100383025   Tyrosine decarboxylase 1 

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Top 50 coexpressed genes to 107928801 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107928801 (ghi-r.1 coexpression data)

CoexMap"107928801"


ghiLOC107928801 | Entrez gene ID : 107928801    
Species ghi sly osa zma bdi mtr bra hvu vvi cit gma bna ath ppo sbi sot nta cre tae
Paralog 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00350 [list] [network] Tyrosine metabolism (108 genes)
ghi00360 [list] [network] Phenylalanine metabolism (75 genes)
ghi00380 [list] [network] Tryptophan metabolism (147 genes)
ghi00901 [list] [network] Indole alkaloid biosynthesis (11 genes)
ghi00950 [list] [network] Isoquinoline alkaloid biosynthesis (56 genes)
ghi00965 [list] [network] Betalain biosynthesis (9 genes)
GO BP
GO:0006520 [list] [network] amino acid metabolic process  (883 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0016831 [list] [network] carboxy-lyase activity  (148 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (218 genes)  IEA  
Protein XP_040942585.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 4,  nucl 1,  mito 1,  pero 1  (predict for XP_040942585.1)
Subcellular
localization
TargetP
other 6  (predict for XP_040942585.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107928801
sly-u.5
for
101251901
osa-u.5
for
4344636
osa-u.5
for
4344637
zma-u.5
for
100279950
zma-u.5
for
100383025


Ortholog ID: 2687
Species ghi ghi cit sly sot sot osa osa zma tae hvu hvu sbi sbi bdi bdi
Symbol LOC121203656 LOC107928801 LOC102607021 LOC101251901 LOC102587268 LOC102600956 LOC4344636 LOC4344637 LOC100383025 LOC123152136 LOC123412543 LOC123410774 LOC8067812 LOC8067813 LOC112271623 LOC100832786
Function* tryptophan decarboxylase TDC1 tryptophan decarboxylase TDC2 tryptophan decarboxylase TDC2-like tryptophan decarboxylase TDC1 aromatic-L-amino-acid decarboxylase-like aromatic-L-amino-acid decarboxylase-like tryptophan decarboxylase 1-like tryptophan decarboxylase 1-like Tyrosine decarboxylase 1 tryptophan decarboxylase 1 tryptophan decarboxylase 1-like tryptophan decarboxylase 1-like aromatic-L-amino-acid decarboxylase aromatic-L-amino-acid decarboxylase aromatic-L-amino-acid decarboxylase-like aromatic-L-amino-acid decarboxylase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi00380 Tryptophan metabolism 2
ghi00901 Indole alkaloid biosynthesis 2
ghi00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi00380 Tryptophan metabolism 2
ghi00901 Indole alkaloid biosynthesis 2
ghi00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
cit03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00350 Tyrosine metabolism 2
sly00360 Phenylalanine metabolism 2
sly00380 Tryptophan metabolism 2
sly00901 Indole alkaloid biosynthesis 2
sly00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00520 Amino sugar and nucleotide sugar metabolism 8
sot04016 MAPK signaling pathway - plant 8
sot00480 Glutathione metabolism 5
sot00350 Tyrosine metabolism 3
sot00360 Phenylalanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00520 Amino sugar and nucleotide sugar metabolism 8
sot04016 MAPK signaling pathway - plant 8
sot00350 Tyrosine metabolism 3
sot00360 Phenylalanine metabolism 3
sot00380 Tryptophan metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa02010 ABC transporters 2
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
osa01230 Biosynthesis of amino acids 2
osa00350 Tyrosine metabolism 2
osa00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
osa01230 Biosynthesis of amino acids 6
osa00380 Tryptophan metabolism 3
osa00260 Glycine, serine and threonine metabolism 2
osa00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00909 Sesquiterpenoid and triterpenoid biosynthesis 2
zma00350 Tyrosine metabolism 2
zma00360 Phenylalanine metabolism 2
zma00380 Tryptophan metabolism 2
zma00901 Indole alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00350 Tyrosine metabolism 10
tae00360 Phenylalanine metabolism 10
tae00380 Tryptophan metabolism 10
tae00901 Indole alkaloid biosynthesis 10
tae00950 Isoquinoline alkaloid biosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00350 Tyrosine metabolism 7
hvu00360 Phenylalanine metabolism 7
hvu00380 Tryptophan metabolism 7
hvu00901 Indole alkaloid biosynthesis 7
hvu00950 Isoquinoline alkaloid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00350 Tyrosine metabolism 7
hvu00360 Phenylalanine metabolism 7
hvu00380 Tryptophan metabolism 7
hvu00901 Indole alkaloid biosynthesis 7
hvu00950 Isoquinoline alkaloid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
sbi01230 Biosynthesis of amino acids 6
sbi00860 Porphyrin metabolism 2
sbi00350 Tyrosine metabolism 2
sbi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
sbi01230 Biosynthesis of amino acids 6
sbi00860 Porphyrin metabolism 2
sbi00350 Tyrosine metabolism 2
sbi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00350 Tyrosine metabolism 6
bdi00360 Phenylalanine metabolism 6
bdi00380 Tryptophan metabolism 6
bdi00901 Indole alkaloid biosynthesis 6
bdi00950 Isoquinoline alkaloid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00350 Tyrosine metabolism 6
bdi00360 Phenylalanine metabolism 6
bdi00380 Tryptophan metabolism 6
bdi00901 Indole alkaloid biosynthesis 6
bdi00950 Isoquinoline alkaloid biosynthesis 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121203656 107928801 102607021 101251901 102587268 102600956 4344636 4344637 100383025 123152136 123412543 123410774 8067812 8067813 112271623 100832786
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