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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100835454   peptide chain release factor PrfB2, chloroplastic 
 tae-r.2   123092368   peptide chain release factor PrfB2, chloroplastic 
 tae-r.2   123097685   peptide chain release factor PrfB2, chloroplastic 
 tae-r.2   123085659   peptide chain release factor PrfB2, chloroplastic 
 hvu-r.1   123448836   peptide chain release factor PrfB2, chloroplastic 
 osa-u.5   4332598   peptide chain release factor PrfB2, chloroplastic 
 zma-u.5   100281737   peptide chain release factor 2 
 sbi-r.1   8083995   peptide chain release factor PrfB2, chloroplastic 
 sbi-r.1   8082710   peptide chain release factor PrfB2, chloroplastic 
 ath-u.5   AT1G56350   Peptide chain release factor 2 
 gma-u.5   100797427   peptide chain release factor PrfB2, chloroplastic 
 sly-u.5   101247467   peptide chain release factor PrfB2, chloroplastic 
 bra-r.6   103849449   peptide chain release factor PrfB2, chloroplastic 
 vvi-u.5   100244239   peptide chain release factor PrfB2, chloroplastic 
 ppo-u.5   7481699   peptide chain release factor PrfB2, chloroplastic 
 mtr-u.5   25499654   peptide chain release factor PrfB2, chloroplastic 
 ghi-r.1   107933789   peptide chain release factor PrfB2, chloroplastic 
 ghi-r.1   107893920   peptide chain release factor PrfB2, chloroplastic 
 bna-r.1   106390634   peptide chain release factor PrfB2, chloroplastic 
 bna-r.1   106346819   peptide chain release factor PrfB2, chloroplastic 
 sot-r.1   102604824   peptide chain release factor PrfB2, chloroplastic 
 nta-r.1   107768426   peptide chain release factor PrfB2, chloroplastic 
 nta-r.1   107821694   peptide chain release factor PrfB2, chloroplastic 

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Top 50 coexpressed genes to 100835454 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100835454 (bdi-r.1 coexpression data)

CoexMap"100835454"


bdiLOC100835454 | Entrez gene ID : 100835454      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot nta cre cit
Paralog 1 3 1 1 1 2 1 1 1 1 1 1 1 2 2 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006415 [list] [network] translational termination  (17 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4615 genes)  IEA  
GO MF
GO:0016149 [list] [network] translation release factor activity, codon specific  (9 genes)  IEA  
Protein XP_003558086.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_003558086.1)
Subcellular
localization
TargetP
chlo 5,  mito 4  (predict for XP_003558086.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100835454
tae-r.2
for
123092368
tae-r.2
for
123097685
tae-r.2
for
123085659
hvu-r.1
for
123448836
osa-u.5
for
4332598
zma-u.5
for
100281737
sbi-r.1
for
8083995
sbi-r.1
for
8082710
ath-u.5
for
AT1G56350
gma-u.5
for
100797427
sly-u.5
for
101247467
bra-r.6
for
103849449
vvi-u.5
for
100244239
ppo-u.5
for
7481699
mtr-u.5
for
25499654
ghi-r.1
for
107933789
ghi-r.1
for
107893920
bna-r.1
for
106390634
bna-r.1
for
106346819
sot-r.1
for
102604824
nta-r.1
for
107768426
nta-r.1
for
107821694


Ortholog ID: 11095
Species bdi tae tae tae hvu osa zma sbi sbi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot nta nta
Symbol LOC100835454 LOC123092368 LOC123097685 LOC123085659 LOC123448836 LOC4332598 LOC100281737 LOC8083995 LOC8082710 AT1G56350 LOC100797427 LOC101247467 LOC103849449 LOC100244239 LOC7481699 LOC25499654 LOC107933789 LOC107893920 LOC106390634 LOC106346819 LOC102604824 LOC107768426 LOC107821694
Function* peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor 2 peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic Peptide chain release factor 2 peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic peptide chain release factor PrfB2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 5
tae00510 N-Glycan biosynthesis 4
tae00900 Terpenoid backbone biosynthesis 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae00510 N-Glycan biosynthesis 3
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 7
tae00510 N-Glycan biosynthesis 4
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 6
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
bna04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 7
bna04382 Cornified envelope formation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100835454 123092368 123097685 123085659 123448836 4332598 100281737 8083995 8082710 842089 100797427 101247467 103849449 100244239 7481699 25499654 107933789 107893920 106390634 106346819 102604824 107768426 107821694
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