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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100836378   protein SHI RELATED SEQUENCE 1 
 bdi-r.1   100833246   protein SHI RELATED SEQUENCE 1 
 bdi-r.1   100837710   protein SHI RELATED SEQUENCE 2 
 osa-u.5   9269394   protein SHORT INTERNODES 1-like 
 osa-u.5   4347669   protein SHORT INTERNODES 1-like 
 osa-u.5   4342046   protein SHORT INTERNODES 1-like 
 zma-u.5   100502392   uncharacterized LOC100502392 
 zma-u.5   100284538   SHI 
 zma-u.5   103647615   protein SHI RELATED SEQUENCE 1 
 sbi-r.1   110432445   protein SHI RELATED SEQUENCE 1-like 
 sbi-r.1   8065614   protein SHI RELATED SEQUENCE 1 
 ath-u.5   SRS5   SHI-related sequence 5 
 gma-u.5   100781981   protein EXPRESSION OF TERPENOIDS 1 
 sly-u.5   101250986   protein EXPRESSION OF TERPENOIDS 1-like 
 sly-u.5   101251254   expression of terpenoids 1 
 vvi-u.5   100260953   protein EXPRESSION OF TERPENOIDS 1 
 vvi-u.5   100250664   protein SHI RELATED SEQUENCE 1 
 mtr-u.5   11419224   protein EXPRESSION OF TERPENOIDS 1 
 mtr-u.5   25501609   protein SHI RELATED SEQUENCE 1 
 ghi-r.1   107896870   protein SHI RELATED SEQUENCE 1 
 ghi-r.1   107905484   protein SHI RELATED SEQUENCE 5 
 ghi-r.1   107887298   protein SHI RELATED SEQUENCE 5 
 sot-r.1   102600089   protein SHI RELATED SEQUENCE 1-like 
 sot-r.1   102584573   protein SHI RELATED SEQUENCE 1 
 cit-r.1   102608794   protein SHI RELATED SEQUENCE 5 
 cit-r.1   102626346   protein SHI RELATED SEQUENCE 1 
 nta-r.1   107806695   protein SHI RELATED SEQUENCE 5-like 
 nta-r.1   107818559   protein SHORT INTERNODES-like 

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Top 50 coexpressed genes to 100836378 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100836378 (bdi-r.1 coexpression data)

CoexMap"100836378"


bdiLOC100836378 | Entrez gene ID : 100836378      
Species bdi osa zma sbi ath gma sly vvi mtr ghi sot cit nta cre bra ppo hvu bna tae
Paralog 3 3 3 2 1 1 2 2 2 3 2 2 2 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (210 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1057 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1744 genes)  IEA  
Protein XP_014757670.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_014757670.1)
Subcellular
localization
TargetP
chlo 6,  other 3  (predict for XP_014757670.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100836378
bdi-r.1
for
100833246
bdi-r.1
for
100837710
osa-u.5
for
9269394
osa-u.5
for
4347669
osa-u.5
for
4342046
zma-u.5
for
100502392
zma-u.5
for
100284538
zma-u.5
for
103647615
sbi-r.1
for
110432445
sbi-r.1
for
8065614
ath-u.5
for
SRS5
gma-u.5
for
100781981
sly-u.5
for
101250986
sly-u.5
for
101251254
vvi-u.5
for
100260953
vvi-u.5
for
100250664
mtr-u.5
for
11419224
mtr-u.5
for
25501609
ghi-r.1
for
107896870
ghi-r.1
for
107905484
ghi-r.1
for
107887298
sot-r.1
for
102600089
sot-r.1
for
102584573
cit-r.1
for
102608794
cit-r.1
for
102626346
nta-r.1
for
107806695
nta-r.1
for
107818559


Ortholog ID: 445
Species bdi bdi bdi tae osa osa osa zma zma zma sbi sbi ath ath gma sly sly bra bra vvi vvi mtr mtr ghi ghi ghi bna sot cit cit nta nta nta
Symbol LOC100836378 LOC100833246 LOC100837710 LOC123152431 LOC9269394 LOC4347669 LOC4342046 LOC100502392 LOC100191342 LOC103629573 LOC110432445 LOC8065614 SRS5 STY2 LOC100797973 LOC101250986 LOC101246779 LOC103841026 SRS7 LOC100260953 LOC100250664 LOC11419224 LOC11439633 LOC107896870 LOC107936562 LOC107917109 LOC106356513 LOC102581821 LOC102608794 LOC102626346 LOC107787046 LOC107807266 LOC107799063
Function* protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 2 protein SHI RELATED SEQUENCE 1 protein SHORT INTERNODES 1-like protein SHORT INTERNODES 1-like protein SHORT INTERNODES 1-like uncharacterized LOC100502392 uncharacterized LOC100191342 protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 1-like protein SHI RELATED SEQUENCE 1 SHI-related sequence 5 Lateral root primordium (LRP) protein-like protein protein SHI RELATED SEQUENCE 1 protein EXPRESSION OF TERPENOIDS 1-like protein EXPRESSION OF TERPENOIDS 1-like protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 7 protein EXPRESSION OF TERPENOIDS 1 protein SHI RELATED SEQUENCE 1 protein EXPRESSION OF TERPENOIDS 1 protein SHI RELATED SEQUENCE 3 protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 5 protein SHORT INTERNODES protein SHI RELATED SEQUENCE 1-like protein SHI RELATED SEQUENCE 5 protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 1-like protein EXPRESSION OF TERPENOIDS 1-like protein EXPRESSION OF TERPENOIDS 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00052 Galactose metabolism 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00906 Carotenoid biosynthesis 2
bra03030 DNA replication 2
bra03440 Homologous recombination 2
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 2
mtr04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00460 Cyanoamino acid metabolism 3
sot00500 Starch and sucrose metabolism 3
sot00999 Biosynthesis of various plant secondary metabolites 3
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 4
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00360 Phenylalanine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100836378 100833246 100837710 123152431 9269394 4347669 4342046 100502392 100191342 103629573 110432445 8065614 843888 829783 100797973 101250986 101246779 103841026 103872782 100260953 100250664 11419224 11439633 107896870 107936562 107917109 106356513 102581821 102608794 102626346 107787046 107807266 107799063
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