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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25501609   protein SHI RELATED SEQUENCE 1 
 mtr-r.5   25501609   protein SHI RELATED SEQUENCE 1 
 mtr-u.5   11439633   protein SHI RELATED SEQUENCE 3 
 gma-u.5   100781981   protein EXPRESSION OF TERPENOIDS 1 
 gma-u.5   100789129   protein EXPRESSION OF TERPENOIDS 1 
 ath-u.5   SRS5   SHI-related sequence 5 
 vvi-u.5   100260953   protein EXPRESSION OF TERPENOIDS 1 
 vvi-u.5   100250664   protein SHI RELATED SEQUENCE 1 
 sly-u.5   101250986   protein EXPRESSION OF TERPENOIDS 1-like 
 sly-u.5   101246779   protein EXPRESSION OF TERPENOIDS 1-like 
 osa-u.5   4347669   protein SHORT INTERNODES 1-like 
 osa-u.5   4342046   protein SHORT INTERNODES 1-like 
 osa-u.5   9269394   protein SHORT INTERNODES 1-like 
 zma-u.5   100502392   uncharacterized LOC100502392 
 zma-u.5   103626446   protein SHI RELATED SEQUENCE 1 
 zma-u.5   103629573   protein SHI RELATED SEQUENCE 1 

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Top 50 coexpressed genes to 25501609 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25501609 (mtr-u.5 coexpression data)

CoexMap"25501609"


mtrLOC25501609 | Entrez gene ID : 25501609      
Species mtr gma ath vvi sly osa zma sbi nta bra cre hvu cit bdi ppo sot tae bna ghi
Paralog 3 2 1 2 2 3 3 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (269 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2707 genes)  IEA  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1100 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2104 genes)  IEA  
Protein XP_013446370.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_013446370.1)
Subcellular
localization
TargetP
other 9,  mito 3  (predict for XP_013446370.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25501609

.
mtr-r.5
for
25501609

.
mtr-u.5
for
11439633

.
gma-u.5
for
100781981

.
gma-u.5
for
100789129

.
ath-u.5
for
SRS5

.
vvi-u.5
for
100260953

.
vvi-u.5
for
100250664

.
sly-u.5
for
101250986

.
sly-u.5
for
101246779

.
osa-u.5
for
4347669

.
osa-u.5
for
4342046

.
osa-u.5
for
9269394

.
zma-u.5
for
100502392

.
zma-u.5
for
103626446

.
zma-u.5
for
103629573

.


Ortholog ID: 445
Species ath sly osa osa zma zma bra vvi mtr tae ghi ghi bna sbi sbi sot cit cit bdi bdi nta nta
Symbol STY2 LOC101246779 LOC4347669 LOC4342046 LOC103629573 LOC100191342 LOC103841026 LOC100250664 LOC11439633 LOC123152431 LOC107896870 LOC107936562 LOC106356513 LOC8065614 LOC110432445 LOC102581821 LOC102626346 LOC102608794 LOC100836378 LOC100837710 LOC107799063 LOC107807266
Function* Lateral root primordium (LRP) protein-like protein protein EXPRESSION OF TERPENOIDS 1-like protein SHORT INTERNODES 1-like protein SHORT INTERNODES 1-like protein SHI RELATED SEQUENCE 1 uncharacterized LOC100191342 protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 3 protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 1 protein SHORT INTERNODES protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 1-like protein SHI RELATED SEQUENCE 1-like protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 5 protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 2 protein EXPRESSION OF TERPENOIDS 1-like protein EXPRESSION OF TERPENOIDS 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00906 Carotenoid biosynthesis 2
bra03030 DNA replication 2
bra03440 Homologous recombination 2
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00460 Cyanoamino acid metabolism 3
sot00500 Starch and sucrose metabolism 3
sot00999 Biosynthesis of various plant secondary metabolites 3
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 4
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829783 101246779 4347669 4342046 103629573 100191342 103841026 100250664 11439633 123152431 107896870 107936562 106356513 8065614 110432445 102581821 102626346 102608794 100836378 100837710 107799063 107807266
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