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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100837853   zinc finger CCCH domain-containing protein 45 
 tae-r.2   123165299   zinc finger CCCH domain-containing protein 45 
 tae-r.2   123157286   zinc finger CCCH domain-containing protein 45 
 tae-r.2   123149073   zinc finger CCCH domain-containing protein 45 
 hvu-r.1   123407783   zinc finger CCCH domain-containing protein 45 
 osa-u.5   4341840   zinc finger CCCH domain-containing protein 45-like 
 zma-u.5   103629640   zinc finger CCCH domain-containing protein 45 
 zma-u.5   103626282   zinc finger CCCH domain-containing protein 45 
 sbi-r.1   8083208   zinc finger CCCH domain-containing protein 45 
 ath-u.5   CPSF30   cleavage and polyadenylation specificity factor 30 
 gma-u.5   100802826   30-kDa cleavage and polyadenylation specificity factor 30 
 gma-u.5   100787159   30-kDa cleavage and polyadenylation specificity factor 30 
 sly-u.5   101254355   30-kDa cleavage and polyadenylation specificity factor 30 
 sly-u.5   101263950   30-kDa cleavage and polyadenylation specificity factor 30 
 bra-r.6   103835212   30-kDa cleavage and polyadenylation specificity factor 30 
 vvi-u.5   100253258   30-kDa cleavage and polyadenylation specificity factor 30 
 ppo-u.5   7487514   30-kDa cleavage and polyadenylation specificity factor 30 
 ppo-u.5   7483632   30-kDa cleavage and polyadenylation specificity factor 30 
 mtr-u.5   25486300   30-kDa cleavage and polyadenylation specificity factor 30 
 ghi-r.1   107945204   30-kDa cleavage and polyadenylation specificity factor 30 
 ghi-r.1   107928461   30-kDa cleavage and polyadenylation specificity factor 30 
 bna-r.1   106361574   30-kDa cleavage and polyadenylation specificity factor 30 
 bna-r.1   106442385   30-kDa cleavage and polyadenylation specificity factor 30 
 sot-r.1   102580551   30-kDa cleavage and polyadenylation specificity factor 30-like 
 sot-r.1   102591572   30-kDa cleavage and polyadenylation specificity factor 30-like 
 cit-r.1   102629136   30-kDa cleavage and polyadenylation specificity factor 30 
 nta-r.1   107806003   30-kDa cleavage and polyadenylation specificity factor 30 
 nta-r.1   107792841   30-kDa cleavage and polyadenylation specificity factor 30 
 nta-r.1   107763220   30-kDa cleavage and polyadenylation specificity factor 30 
 cre-r.1   CHLRE_24g755647v5   uncharacterized protein 

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Top 50 coexpressed genes to 100837853 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100837853 (bdi-r.1 coexpression data)

CoexMap"100837853"


bdiLOC100837853 | Entrez gene ID : 100837853      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 2 1 1 2 2 1 1 2 1 2 2 2 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03015 [list] [network] mRNA surveillance pathway (130 genes)
GO BP
GO:0048024 [list] [network] regulation of mRNA splicing, via spliceosome  (19 genes)  IEA  
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (166 genes)  IEA  
GO CC
GO:0005654 [list] [network] nucleoplasm  (221 genes)  IEA  
GO MF
GO:1990247 [list] [network] N6-methyladenosine-containing RNA reader activity  (1 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (271 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (1763 genes)  IEA  
Protein XP_003563404.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  plas 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_003563404.1)
Subcellular
localization
TargetP
other 9  (predict for XP_003563404.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100837853
tae-r.2
for
123165299
tae-r.2
for
123157286
tae-r.2
for
123149073
hvu-r.1
for
123407783
osa-u.5
for
4341840
zma-u.5
for
103629640
zma-u.5
for
103626282
sbi-r.1
for
8083208
ath-u.5
for
CPSF30
gma-u.5
for
100802826
gma-u.5
for
100787159
sly-u.5
for
101254355
sly-u.5
for
101263950
bra-r.6
for
103835212
vvi-u.5
for
100253258
ppo-u.5
for
7487514
ppo-u.5
for
7483632
mtr-u.5
for
25486300
ghi-r.1
for
107945204
ghi-r.1
for
107928461
bna-r.1
for
106361574
bna-r.1
for
106442385
sot-r.1
for
102580551
sot-r.1
for
102591572
cit-r.1
for
102629136
nta-r.1
for
107806003
nta-r.1
for
107792841
nta-r.1
for
107763220
cre-r.1
for
CHLRE_24g755647v5


Ortholog ID: 7055
Species bdi tae tae tae hvu osa zma zma sbi ath gma gma sly sly bra vvi ppo ppo mtr ghi ghi bna bna sot sot cit nta nta nta cre
Symbol LOC100837853 LOC123165299 LOC123157286 LOC123149073 LOC123407783 LOC4341840 LOC103629640 LOC103626282 LOC8083208 CPSF30 LOC100802826 LOC100787159 LOC101254355 LOC101263950 LOC103835212 LOC100253258 LOC7487514 LOC7483632 LOC25486300 LOC107945204 LOC107928461 LOC106361574 LOC106442385 LOC102580551 LOC102591572 LOC102629136 LOC107806003 LOC107763220 LOC107823224 CHLRE_24g755647v5
Function* zinc finger CCCH domain-containing protein 45 zinc finger CCCH domain-containing protein 45 zinc finger CCCH domain-containing protein 45 zinc finger CCCH domain-containing protein 45 zinc finger CCCH domain-containing protein 45 zinc finger CCCH domain-containing protein 45-like zinc finger CCCH domain-containing protein 45 zinc finger CCCH domain-containing protein 45 zinc finger CCCH domain-containing protein 45 cleavage and polyadenylation specificity factor 30 30-kDa cleavage and polyadenylation specificity factor 30 30-kDa cleavage and polyadenylation specificity factor 30 30-kDa cleavage and polyadenylation specificity factor 30 30-kDa cleavage and polyadenylation specificity factor 30 30-kDa cleavage and polyadenylation specificity factor 30 30-kDa cleavage and polyadenylation specificity factor 30 30-kDa cleavage and polyadenylation specificity factor 30 30-kDa cleavage and polyadenylation specificity factor 30 30-kDa cleavage and polyadenylation specificity factor 30 30-kDa cleavage and polyadenylation specificity factor 30 30-kDa cleavage and polyadenylation specificity factor 30 30-kDa cleavage and polyadenylation specificity factor 30 30-kDa cleavage and polyadenylation specificity factor 30 30-kDa cleavage and polyadenylation specificity factor 30-like 30-kDa cleavage and polyadenylation specificity factor 30-like 30-kDa cleavage and polyadenylation specificity factor 30 30-kDa cleavage and polyadenylation specificity factor 30 30-kDa cleavage and polyadenylation specificity factor 30 30-kDa cleavage and polyadenylation specificity factor 30 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03040 Spliceosome 4
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03013 Nucleocytoplasmic transport 3
hvu03015 mRNA surveillance pathway 3
hvu03022 Basal transcription factors 2
hvu03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03015 mRNA surveillance pathway 4
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03015 mRNA surveillance pathway 2
sbi03018 RNA degradation 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03013 Nucleocytoplasmic transport 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
gma03250 Viral life cycle - HIV-1 2
gma00270 Cysteine and methionine metabolism 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
vvi03040 Spliceosome 3
vvi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
ghi03015 mRNA surveillance pathway 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
ghi03015 mRNA surveillance pathway 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit04141 Protein processing in endoplasmic reticulum 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 3
nta03250 Viral life cycle - HIV-1 3
nta03040 Spliceosome 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100837853 123165299 123157286 123149073 123407783 4341840 103629640 103626282 8083208 839925 100802826 100787159 101254355 101263950 103835212 100253258 7487514 7483632 25486300 107945204 107928461 106361574 106442385 102580551 102591572 102629136 107806003 107763220 107823224 66057308
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