ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100837934	DEAD-box ATP-dependent RNA helicase 7
tae-r.2	123122230	DEAD-box ATP-dependent RNA helicase 7
tae-r.2	123112752	DEAD-box ATP-dependent RNA helicase 7
tae-r.2	123104455	DEAD-box ATP-dependent RNA helicase 7
hvu-r.1	123399988	DEAD-box ATP-dependent RNA helicase 7
osa-u.5	4347610	DEAD-box ATP-dependent RNA helicase 7-like
zma-u.5	103633047	DEAD-box ATP-dependent RNA helicase 7
zma-u.5	100193061	DEAD-box ATP-dependent RNA helicase 7
sbi-r.1	8054863	DEAD-box ATP-dependent RNA helicase 7
ath-u.5	PRH75	DEAD box RNA helicase (PRH75)
gma-u.5	100820207	DEAD-box ATP-dependent RNA helicase 7
gma-u.5	100805921	DEAD-box ATP-dependent RNA helicase 7
sly-u.5	101243764	DEAD-box ATP-dependent RNA helicase 7-like
sly-u.5	101245658	DEAD-box ATP-dependent RNA helicase 7
bra-r.6	103837405	DEAD-box ATP-dependent RNA helicase 7
bra-r.6	103854992	DEAD-box ATP-dependent RNA helicase 7
vvi-u.5	100258263	DEAD-box ATP-dependent RNA helicase 7
ppo-u.5	7476774	DEAD-box ATP-dependent RNA helicase 7
ppo-u.5	7482169	DEAD-box ATP-dependent RNA helicase 7
mtr-u.5	11409014	DEAD-box ATP-dependent RNA helicase 7
mtr-u.5	25496562	DEAD-box ATP-dependent RNA helicase 7
ghi-r.1	107931029	DEAD-box ATP-dependent RNA helicase 7
ghi-r.1	107947274	DEAD-box ATP-dependent RNA helicase 7
ghi-r.1	107962846	DEAD-box ATP-dependent RNA helicase 7
bna-r.1	111209947	DEAD-box ATP-dependent RNA helicase 7
bna-r.1	111216227	DEAD-box ATP-dependent RNA helicase 7-like
bna-r.1	125594543	DEAD-box ATP-dependent RNA helicase 7-like
sot-r.1	102582907	DEAD-box ATP-dependent RNA helicase 7-like
sot-r.1	102601822	DEAD-box ATP-dependent RNA helicase 7-like
cit-r.1	102628005	DEAD-box ATP-dependent RNA helicase 7
nta-r.1	107818827	DEAD-box ATP-dependent RNA helicase 7-like
nta-r.1	107781594	DEAD-box ATP-dependent RNA helicase 7-like
nta-r.1	107816023	DEAD-box ATP-dependent RNA helicase 7
cre-r.1	CHLRE_02g118300v5	uncharacterized protein

Top 50 coexpressed genes to 100837934 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100837934 (bdi-r.1 coexpression data)

CoexMap"100837934"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0004386 [list] [network] helicase activity	(125 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1239 genes)	IEA
GO:0005524 [list] [network] ATP binding	(1995 genes)	IEA

Protein

XP_003578458.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 4, chlo 1

(predict for XP_003578458.1)

Subcellular
localization
TargetP

other 7, chlo 4

(predict for XP_003578458.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100837934	tae-r.2 for 123122230	tae-r.2 for 123112752	tae-r.2 for 123104455	hvu-r.1 for 123399988	osa-u.5 for 4347610	zma-u.5 for 103633047	zma-u.5 for 100193061	sbi-r.1 for 8054863	ath-u.5 for PRH75	gma-u.5 for 100820207	gma-u.5 for 100805921	sly-u.5 for 101243764	sly-u.5 for 101245658	bra-r.6 for 103837405	bra-r.6 for 103854992	vvi-u.5 for 100258263	ppo-u.5 for 7476774	ppo-u.5 for 7482169	mtr-u.5 for 11409014	mtr-u.5 for 25496562	ghi-r.1 for 107931029	ghi-r.1 for 107947274	ghi-r.1 for 107962846	bna-r.1 for 111209947	bna-r.1 for 111216227	bna-r.1 for 125594543	sot-r.1 for 102582907	sot-r.1 for 102601822	cit-r.1 for 102628005	nta-r.1 for 107818827	nta-r.1 for 107781594	nta-r.1 for 107816023	cre-r.1 for CHLRE_02g118300v5

Ortholog

Ortholog ID: 5396

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

PRH75

Function^*