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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100838635   pentatricopeptide repeat-containing protein At1g63080, mitochondrial 
 tae-r.2   123105386   pentatricopeptide repeat-containing protein At3g22470, mitochondrial 
 hvu-r.1   123452681   pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like 
 osa-u.5   4334414   pentatricopeptide repeat-containing protein At1g12775, mitochondrial 
 zma-u.5   103644172   pentatricopeptide repeat-containing protein 
 sbi-r.1   8081262   pentatricopeptide repeat-containing protein At1g63130, mitochondrial 
 gma-u.5   100780805   pentatricopeptide repeat-containing protein At1g05600 
 gma-u.5   100779200   pentatricopeptide repeat-containing protein At5g64320, mitochondrial 
 sly-u.5   101250554   pentatricopeptide repeat-containing protein At1g63330-like 
 ppo-u.5   18098459   pentatricopeptide repeat-containing protein At1g62590 
 ppo-u.5   7465210   pentatricopeptide repeat-containing protein At1g63330 
 mtr-u.5   25485789   pentatricopeptide repeat-containing protein At5g64320, mitochondrial 
 ghi-r.1   107927248   pentatricopeptide repeat-containing protein At1g62670, mitochondrial 
 ghi-r.1   107886552   pentatricopeptide repeat-containing protein At1g63330 
 sot-r.1   102583452   pentatricopeptide repeat-containing protein At1g63130, mitochondrial-like 
 cit-r.1   102629585   pentatricopeptide repeat-containing protein At1g63330-like 
 nta-r.1   107796832   uncharacterized LOC107796832 
 nta-r.1   107773077   uncharacterized LOC107773077 
 nta-r.1   142161787   putative pentatricopeptide repeat-containing protein At1g26500 

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Top 50 coexpressed genes to 100838635 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100838635 (bdi-r.1 coexpression data)

CoexMap"100838635"


bdiLOC100838635 | Entrez gene ID : 100838635      
Species bdi tae hvu osa zma sbi gma sly ppo mtr ghi sot cit nta bra cre ath bna vvi
Paralog 1 1 1 1 1 1 2 1 2 1 2 1 1 3 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_010228446.1 [sequence] [blastp]
XP_010228449.1 [sequence] [blastp]
XP_010228455.1 [sequence] [blastp]
XP_010228457.1 [sequence] [blastp]
XP_024313470.1 [sequence] [blastp]
XP_024313471.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 1,  nucl 1  (predict for XP_010228446.1)
chlo 6,  chlo_mito 4,  mito 1,  nucl 1  (predict for XP_010228449.1)
chlo 6,  chlo_mito 4,  mito 1,  nucl 1  (predict for XP_010228455.1)
chlo 6,  chlo_mito 4,  mito 1,  nucl 1  (predict for XP_010228457.1)
chlo 6,  chlo_mito 4,  mito 1,  nucl 1  (predict for XP_024313470.1)
chlo 6,  chlo_mito 4,  mito 1,  nucl 1  (predict for XP_024313471.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_010228446.1)
mito 8  (predict for XP_010228449.1)
mito 8  (predict for XP_010228455.1)
mito 8  (predict for XP_010228457.1)
mito 8  (predict for XP_024313470.1)
mito 8  (predict for XP_024313471.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100838635
tae-r.2
for
123105386
hvu-r.1
for
123452681
osa-u.5
for
4334414
zma-u.5
for
103644172
sbi-r.1
for
8081262
gma-u.5
for
100780805
gma-u.5
for
100779200
sly-u.5
for
101250554
ppo-u.5
for
18098459
ppo-u.5
for
7465210
mtr-u.5
for
25485789
ghi-r.1
for
107927248
ghi-r.1
for
107886552
sot-r.1
for
102583452
cit-r.1
for
102629585
nta-r.1
for
107796832
nta-r.1
for
107773077
nta-r.1
for
142161787


Ortholog ID: 12333
Species bdi tae hvu osa zma sbi gma gma sly ppo ppo mtr ghi ghi sot cit nta nta nta
Symbol LOC100838635 LOC123105386 LOC123452681 LOC4334414 LOC103644172 LOC8081262 LOC100780805 LOC100779200 LOC101250554 LOC18098459 LOC7465210 LOC25485789 LOC107927248 LOC107886552 LOC102583452 LOC102629585 LOC107796832 LOC142161787 LOC142173298
Function* pentatricopeptide repeat-containing protein At1g63080, mitochondrial pentatricopeptide repeat-containing protein At3g22470, mitochondrial pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like pentatricopeptide repeat-containing protein At1g12775, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g63130, mitochondrial pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At5g64320, mitochondrial pentatricopeptide repeat-containing protein At1g63330-like pentatricopeptide repeat-containing protein At1g62590 pentatricopeptide repeat-containing protein At1g63330 pentatricopeptide repeat-containing protein At5g64320, mitochondrial pentatricopeptide repeat-containing protein At1g62670, mitochondrial pentatricopeptide repeat-containing protein At1g63330 pentatricopeptide repeat-containing protein At1g63130, mitochondrial-like pentatricopeptide repeat-containing protein At1g63330-like uncharacterized LOC107796832 putative pentatricopeptide repeat-containing protein At1g26500 putative pentatricopeptide repeat-containing protein At1g26500
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 6
sot04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100838635 123105386 123452681 4334414 103644172 8081262 100780805 100779200 101250554 18098459 7465210 25485789 107927248 107886552 102583452 102629585 107796832 142161787 142173298
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