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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7465210   pentatricopeptide repeat-containing protein At1g63330 
 ppo-r.4   7465210   pentatricopeptide repeat-containing protein At1g63330 
 ppo-m.4   7465210   pentatricopeptide repeat-containing protein At1g63330 
 ppo-u.5   18098459   pentatricopeptide repeat-containing protein At1g62590 
 gma-u.5   100779200   pentatricopeptide repeat-containing protein At5g64320, mitochondrial 
 gma-u.5   100780805   pentatricopeptide repeat-containing protein At1g05600 
 mtr-u.5   25485789   pentatricopeptide repeat-containing protein At5g64320, mitochondrial 
 sly-u.5   101250554   pentatricopeptide repeat-containing protein At1g63330-like 
 osa-u.5   4334414   pentatricopeptide repeat-containing protein At1g12775, mitochondrial 
 zma-u.5   103644172   pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 7465210 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7465210 (ppo-u.5 coexpression data)

CoexMap"7465210"


ppoLOC7465210 | Entrez gene ID : 7465210    
Species ppo gma mtr sly osa zma sbi nta bra cre vvi cit hvu bdi sot tae ath bna ghi
Paralog 4 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002318926.3 [sequence] [blastp]
XP_052302271.1 [sequence] [blastp]
XP_052302272.1 [sequence] [blastp]
XP_052302273.1 [sequence] [blastp]
XP_052302274.1 [sequence] [blastp]
XP_052302275.1 [sequence] [blastp]
XP_052302276.1 [sequence] [blastp]
XP_052302277.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_002318926.3)
chlo 4,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_052302271.1)
chlo 4,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_052302272.1)
chlo 4,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_052302273.1)
chlo 4,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_052302274.1)
chlo 4,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_052302275.1)
chlo 4,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_052302276.1)
chlo 4,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_052302277.1)
Subcellular
localization
TargetP
scret 4  (predict for XP_002318926.3)
scret 4  (predict for XP_052302271.1)
scret 4  (predict for XP_052302272.1)
scret 4  (predict for XP_052302273.1)
scret 4  (predict for XP_052302274.1)
scret 4  (predict for XP_052302275.1)
scret 4  (predict for XP_052302276.1)
scret 4  (predict for XP_052302277.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7465210

.
ppo-r.4
for
7465210

.
ppo-m.4
for
7465210

.
ppo-u.5
for
18098459

.
gma-u.5
for
100779200

.
gma-u.5
for
100780805

.
mtr-u.5
for
25485789

.
sly-u.5
for
101250554

.
osa-u.5
for
4334414

.
zma-u.5
for
103644172

.


Ortholog ID: 12333
Species gma gma sly osa zma ppo ppo mtr tae hvu ghi ghi sbi sot cit bdi nta nta
Symbol LOC100780805 LOC100779200 LOC101250554 LOC4334414 LOC103644172 LOC18098459 LOC7465210 LOC25485789 LOC123105386 LOC123452681 LOC107927248 LOC107886552 LOC8081262 LOC102583452 LOC102629585 LOC100838635 LOC107796832 LOC142173298
Function* pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At5g64320, mitochondrial pentatricopeptide repeat-containing protein At1g63330-like pentatricopeptide repeat-containing protein At1g12775, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g62590 pentatricopeptide repeat-containing protein At1g63330 pentatricopeptide repeat-containing protein At5g64320, mitochondrial pentatricopeptide repeat-containing protein At3g22470, mitochondrial pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like pentatricopeptide repeat-containing protein At1g62670, mitochondrial pentatricopeptide repeat-containing protein At1g63330 pentatricopeptide repeat-containing protein At1g63130, mitochondrial pentatricopeptide repeat-containing protein At1g63130, mitochondrial-like pentatricopeptide repeat-containing protein At1g63330-like pentatricopeptide repeat-containing protein At1g63080, mitochondrial uncharacterized LOC107796832 putative pentatricopeptide repeat-containing protein At1g26500
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 6
sot04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100780805 100779200 101250554 4334414 103644172 18098459 7465210 25485789 123105386 123452681 107927248 107886552 8081262 102583452 102629585 100838635 107796832 142173298
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