Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100839561   putative pentatricopeptide repeat-containing protein At4g17915 
 tae-r.2   123086715   putative pentatricopeptide repeat-containing protein At4g17915 
 hvu-r.1   123447961   putative pentatricopeptide repeat-containing protein At4g17915 
 osa-u.5   4330986   putative pentatricopeptide repeat-containing protein At4g17915 
 zma-u.5   100384682   Pentatricopeptide repeat-containing protein 
 sbi-r.1   8079715   putative pentatricopeptide repeat-containing protein At4g17915 
 ath-u.5   AT5G46680   Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5   100808229   putative pentatricopeptide repeat-containing protein At4g17915 
 sly-u.5   101255901   putative pentatricopeptide repeat-containing protein At4g17915 
 sly-u.5   101263177   putative pentatricopeptide repeat-containing protein At4g17915 
 bra-r.6   103853732   pentatricopeptide repeat-containing protein At5g46680 
 bra-r.6   103860954   putative pentatricopeptide repeat-containing protein At4g17915 
 vvi-u.5   100257981   putative pentatricopeptide repeat-containing protein At4g17915 
 ppo-u.5   7458478   putative pentatricopeptide repeat-containing protein At4g17915 
 mtr-u.5   11445614   putative pentatricopeptide repeat-containing protein At4g17915 
 ghi-r.1   107918514   putative pentatricopeptide repeat-containing protein At4g17915 
 ghi-r.1   107936369   putative ABC transporter C family member 15 
 bna-r.1   106407479   putative pentatricopeptide repeat-containing protein At4g17915 
 bna-r.1   106440207   putative pentatricopeptide repeat-containing protein At4g17915 
 sot-r.1   102585308   putative pentatricopeptide repeat-containing protein At4g17915 
 sot-r.1   102605526   putative pentatricopeptide repeat-containing protein At4g17915 
 cit-r.1   102607642   putative pentatricopeptide repeat-containing protein At4g17915 
 nta-r.1   107821808   uncharacterized LOC107821808 
 nta-r.1   107785781   uncharacterized LOC107785781 
 nta-r.1   107773423   uncharacterized LOC107773423 

close


Top 50 coexpressed genes to 100839561 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100839561 (bdi-r.1 coexpression data)

CoexMap"100839561"


bdiLOC100839561 | Entrez gene ID : 100839561      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 1 1 1 1 1 2 2 1 1 1 2 2 2 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_014757475.1 [sequence] [blastp]
XP_014757477.1 [sequence] [blastp]
XP_014757479.1 [sequence] [blastp]
XP_014757480.1 [sequence] [blastp]
XP_024311052.1 [sequence] [blastp]
XP_024311053.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4  (predict for XP_014757475.1)
chlo 5,  mito 4  (predict for XP_014757477.1)
chlo 5,  mito 4  (predict for XP_014757479.1)
chlo 5,  mito 4  (predict for XP_014757480.1)
chlo 5,  mito 4  (predict for XP_024311052.1)
chlo 5,  mito 4  (predict for XP_024311053.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_014757475.1)
mito 4  (predict for XP_014757477.1)
mito 4  (predict for XP_014757479.1)
mito 4  (predict for XP_014757480.1)
mito 4  (predict for XP_024311052.1)
mito 4  (predict for XP_024311053.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100839561
tae-r.2
for
123086715
hvu-r.1
for
123447961
osa-u.5
for
4330986
zma-u.5
for
100384682
sbi-r.1
for
8079715
ath-u.5
for
AT5G46680
gma-u.5
for
100808229
sly-u.5
for
101255901
sly-u.5
for
101263177
bra-r.6
for
103853732
bra-r.6
for
103860954
vvi-u.5
for
100257981
ppo-u.5
for
7458478
mtr-u.5
for
11445614
ghi-r.1
for
107918514
ghi-r.1
for
107936369
bna-r.1
for
106407479
bna-r.1
for
106440207
sot-r.1
for
102585308
sot-r.1
for
102605526
cit-r.1
for
102607642
nta-r.1
for
107821808
nta-r.1
for
107785781
nta-r.1
for
107773423


Ortholog ID: 7368
Species bdi tae hvu osa zma sbi ath gma sly sly bra bra vvi ppo mtr ghi ghi bna sot sot cit nta nta nta
Symbol LOC100839561 LOC123086715 LOC123447961 LOC4330986 LOC100384682 LOC8079715 AT5G46680 LOC100808229 LOC101255901 LOC101263177 LOC103853732 LOC103860954 LOC100257981 LOC7458478 LOC11445614 LOC107918514 LOC107936369 LOC106440207 LOC102585308 LOC102605526 LOC102607642 LOC107785781 LOC107773423 LOC107817333
Function* putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 Pentatricopeptide repeat-containing protein putative pentatricopeptide repeat-containing protein At4g17915 Pentatricopeptide repeat (PPR-like) superfamily protein putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 pentatricopeptide repeat-containing protein At5g46680 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative ABC transporter C family member 15 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 putative pentatricopeptide repeat-containing protein At4g17915 uncharacterized LOC107785781 uncharacterized LOC107773423 uncharacterized LOC107817333
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100839561 123086715 123447961 4330986 100384682 8079715 834711 100808229 101255901 101263177 103853732 103860954 100257981 7458478 11445614 107918514 107936369 106440207 102585308 102605526 102607642 107785781 107773423 107817333
The preparation time of this page was 0.1 [sec].